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MIR198 (microRNA 198)

Identity

Alias_namesMIRN198
Alias_symbol (synonym)hsa-mir-198
Other aliasmiR-198
HGNC (Hugo) MIR198
LocusID (NCBI) 406975
Atlas_Id 51300
Location 3q13.33  [Link to chromosome band 3q13]
Location_base_pair Starts at 120114515 and ends at 120114576 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR198   31570
Cards
Entrez_Gene (NCBI)MIR198  406975  microRNA 198
AliasesMIRN198; miR-198
GeneCards (Weizmann)MIR198
Ensembl hg19 (Hinxton) [Gene_View]  chr3:120114515-120114576 [Contig_View]  MIR198 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:120114515-120114576 [Contig_View]  MIR198 [Vega]
TCGA cBioPortalMIR198
AceView (NCBI)MIR198
Genatlas (Paris)MIR198
WikiGenes406975
SOURCE (Princeton)MIR198
Genetics Home Reference (NIH)MIR198
miRBaseMIR198
dbDEMCMIR198
Genomic and cartography
GoldenPath hg19 (UCSC)MIR198  -     chr3:120114515-120114576 -  3q13.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR198  -     3q13.33   [Description]    (hg38-Dec_2013)
EnsemblMIR198 - 3q13.33 [CytoView hg19]  MIR198 - 3q13.33 [CytoView hg38]
Mapping of homologs : NCBIMIR198 [Mapview hg19]  MIR198 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ560755
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)MIR198
Gene ExpressionMIR198 [ NCBI-GEO ]   MIR198 [ EBI - ARRAY_EXPRESS ]   MIR198 [ SEEK ]   MIR198 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR198 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)406975
GTEX Portal (Tissue expression)MIR198
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR198
DMDM Disease mutations406975
Blocks (Seattle)MIR198
Protein Interaction databases
BioGRIDMIR198
STRING (EMBL)MIR198
ZODIACMIR198
Ontologies - Pathways
Huge Navigator MIR198 [HugePedia]
snp3D : Map Gene to Disease406975
BioCentury BCIQMIR198
ClinGenMIR198
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD406975
Chemical/Pharm GKB GenePA164722568
Clinical trialMIR198
Miscellaneous
canSAR (ICR)MIR198 (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR198
EVEXMIR198
GoPubMedMIR198
iHOPMIR198
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 30 15:09:36 CEST 2017

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