Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR199A1 (microRNA 199a-1)

Identity

Alias_namesMIRN199A1
Alias_symbol (synonym)hsa-mir-199a-1
Other aliasMIR-199-s
mir-199a-1
HGNC (Hugo) MIR199A1
LocusID (NCBI) 406976
Atlas_Id 50334
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 10817426 and ends at 10817496 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR199A1   31571
Cards
Entrez_Gene (NCBI)MIR199A1  406976  microRNA 199a-1
AliasesMIR-199-s; MIRN199A1; mir-199a-1
GeneCards (Weizmann)MIR199A1
Ensembl hg19 (Hinxton)ENSG00000207752 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207752 [Gene_View]  chr19:10817426-10817496 [Contig_View]  MIR199A1 [Vega]
ICGC DataPortalENSG00000207752
TCGA cBioPortalMIR199A1
AceView (NCBI)MIR199A1
Genatlas (Paris)MIR199A1
WikiGenes406976
SOURCE (Princeton)MIR199A1
Genetics Home Reference (NIH)MIR199A1
miRBaseMIR199A1
dbDEMCMIR199A1
Genomic and cartography
GoldenPath hg38 (UCSC)MIR199A1  -     chr19:10817426-10817496 -  19p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR199A1  -     19p13.2   [Description]    (hg19-Feb_2009)
EnsemblMIR199A1 - 19p13.2 [CytoView hg19]  MIR199A1 - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBIMIR199A1 [Mapview hg19]  MIR199A1 [Mapview hg38]
OMIM610719   
Gene and transcription
Genbank (Entrez)AJ560756 LM608321
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR199A1
Alternative Splicing GalleryENSG00000207752
Gene ExpressionMIR199A1 [ NCBI-GEO ]   MIR199A1 [ EBI - ARRAY_EXPRESS ]   MIR199A1 [ SEEK ]   MIR199A1 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR199A1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)406976
GTEX Portal (Tissue expression)MIR199A1
Human Protein AtlasENSG00000207752-MIR199A1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR199A1
DMDM Disease mutations406976
Blocks (Seattle)MIR199A1
Human Protein Atlas [tissue]ENSG00000207752-MIR199A1 [tissue]
Protein Interaction databases
FunCoupENSG00000207752
BioGRIDMIR199A1
STRING (EMBL)MIR199A1
ZODIACMIR199A1
Ontologies - Pathways
Huge Navigator MIR199A1 [HugePedia]
snp3D : Map Gene to Disease406976
BioCentury BCIQMIR199A1
ClinGenMIR199A1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD406976
Chemical/Pharm GKB GenePA164722569
Clinical trialMIR199A1
Miscellaneous
canSAR (ICR)MIR199A1 (select the gene name)
Probes
Litterature
PubMed93 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR199A1
EVEXMIR199A1
GoPubMedMIR199A1
iHOPMIR199A1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:59:19 CET 2017

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