Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR200CHG (MIR200C and MIR141 host gene)

Identity

Alias_symbol (synonym)U47924.27
Other alias
HGNC (Hugo) MIR200CHG
LocusID (NCBI) 105369635
Atlas_Id 79172
Location 12p13.31  [Link to chromosome band 12p13]
Location_base_pair Starts at 6963245 and ends at 6964447 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR200CHG   53161
Cards
Entrez_Gene (NCBI)MIR200CHG  105369635  MIR200C and MIR141 host gene
AliasesU47924.27
GeneCards (Weizmann)MIR200CHG
Ensembl hg19 (Hinxton)ENSG00000257084 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000257084 [Gene_View]  chr12:6963245-6964447 [Contig_View]  MIR200CHG [Vega]
ICGC DataPortalENSG00000257084
TCGA cBioPortalMIR200CHG
AceView (NCBI)MIR200CHG
Genatlas (Paris)MIR200CHG
WikiGenes105369635
SOURCE (Princeton)MIR200CHG
Genetics Home Reference (NIH)MIR200CHG
miRBaseMIR200CHG
dbDEMCMIR200CHG
Genomic and cartography
GoldenPath hg38 (UCSC)MIR200CHG  -     chr12:6963245-6964447 +  12p13.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR200CHG  -     12p13.31   [Description]    (hg19-Feb_2009)
EnsemblMIR200CHG - 12p13.31 [CytoView hg19]  MIR200CHG - 12p13.31 [CytoView hg38]
Mapping of homologs : NCBIMIR200CHG [Mapview hg19]  MIR200CHG [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA863395 BX094730
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR200CHG
Cluster EST : UnigeneHs.744442 [ NCBI ]
CGAP (NCI)Hs.744442
Alternative Splicing GalleryENSG00000257084
Gene ExpressionMIR200CHG [ NCBI-GEO ]   MIR200CHG [ EBI - ARRAY_EXPRESS ]   MIR200CHG [ SEEK ]   MIR200CHG [ MEM ]
Gene Expression Viewer (FireBrowse)MIR200CHG [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105369635
GTEX Portal (Tissue expression)MIR200CHG
Human Protein AtlasENSG00000257084-MIR200CHG [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR200CHG
DMDM Disease mutations105369635
Blocks (Seattle)MIR200CHG
Human Protein Atlas [tissue]ENSG00000257084-MIR200CHG [tissue]
Protein Interaction databases
FunCoupENSG00000257084
BioGRIDMIR200CHG
STRING (EMBL)MIR200CHG
ZODIACMIR200CHG
Ontologies - Pathways
Huge Navigator MIR200CHG [HugePedia]
snp3D : Map Gene to Disease105369635
BioCentury BCIQMIR200CHG
ClinGenMIR200CHG
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105369635
Clinical trialMIR200CHG
Miscellaneous
canSAR (ICR)MIR200CHG (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR200CHG
EVEXMIR200CHG
GoPubMedMIR200CHG
iHOPMIR200CHG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:26:49 CET 2017

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