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MIR2054 (microRNA 2054)

Identity

Alias_symbol (synonym)hsa-mir-2054
Other alias
HGNC (Hugo) MIR2054
LocusID (NCBI) 100302267
Atlas_Id 69107
Location 4q28.1  [Link to chromosome band 4q28]
Location_base_pair Starts at 125507259 and ends at 125507307 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR2054   37070
Cards
Entrez_Gene (NCBI)MIR2054  100302267  microRNA 2054
Aliaseshsa-mir-2054
GeneCards (Weizmann)MIR2054
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr4:125507259-125507307 [Contig_View]  MIR2054 [Vega]
TCGA cBioPortalMIR2054
AceView (NCBI)MIR2054
Genatlas (Paris)MIR2054
WikiGenes100302267
SOURCE (Princeton)MIR2054
Genetics Home Reference (NIH)MIR2054
miRBaseMIR2054
dbDEMCMIR2054
Genomic and cartography
GoldenPath hg38 (UCSC)MIR2054  -     chr4:125507259-125507307 +  4q28.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR2054  -     4q28.1   [Description]    (hg19-Feb_2009)
EnsemblMIR2054 - 4q28.1 [CytoView hg19]  MIR2054 - 4q28.1 [CytoView hg38]
Mapping of homologs : NCBIMIR2054 [Mapview hg19]  MIR2054 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR2054
Gene ExpressionMIR2054 [ NCBI-GEO ]   MIR2054 [ EBI - ARRAY_EXPRESS ]   MIR2054 [ SEEK ]   MIR2054 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR2054 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100302267
GTEX Portal (Tissue expression)MIR2054
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR2054
DMDM Disease mutations100302267
Blocks (Seattle)MIR2054
Protein Interaction databases
BioGRIDMIR2054
STRING (EMBL)MIR2054
ZODIACMIR2054
Ontologies - Pathways
Huge Navigator MIR2054 [HugePedia]
snp3D : Map Gene to Disease100302267
BioCentury BCIQMIR2054
ClinGenMIR2054
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100302267
Chemical/Pharm GKB GenePA164722584
Clinical trialMIR2054
Miscellaneous
canSAR (ICR)MIR2054 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR2054
EVEXMIR2054
GoPubMedMIR2054
iHOPMIR2054
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:10:29 CET 2017

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