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MIR2117HG (MIR2117 host gene)

Identity

Other alias-
HGNC (Hugo) MIR2117HG
LocusID (NCBI) 106660605
Atlas_Id 79944
Location 17q21.31  [Link to chromosome band 17q21]
Location_base_pair Starts at 43444707 and ends at 43451197 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)MIR2117HG   51999
Cards
Entrez_Gene (NCBI)MIR2117HG  106660605  MIR2117 host gene
Aliases
GeneCards (Weizmann)MIR2117HG
Ensembl hg19 (Hinxton)ENSG00000267151 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000267151 [Gene_View]  chr17:43444707-43451197 [Contig_View]  MIR2117HG [Vega]
ICGC DataPortalENSG00000267151
TCGA cBioPortalMIR2117HG
AceView (NCBI)MIR2117HG
Genatlas (Paris)MIR2117HG
WikiGenes106660605
SOURCE (Princeton)MIR2117HG
Genetics Home Reference (NIH)MIR2117HG
miRBaseMIR2117HG
dbDEMCMIR2117HG
Genomic and cartography
GoldenPath hg38 (UCSC)MIR2117HG  -     chr17:43444707-43451197 +  17q21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR2117HG  -     17q21.31   [Description]    (hg19-Feb_2009)
EnsemblMIR2117HG - 17q21.31 [CytoView hg19]  MIR2117HG - 17q21.31 [CytoView hg38]
Mapping of homologs : NCBIMIR2117HG [Mapview hg19]  MIR2117HG [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA448302
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR2117HG
Alternative Splicing GalleryENSG00000267151
Gene ExpressionMIR2117HG [ NCBI-GEO ]   MIR2117HG [ EBI - ARRAY_EXPRESS ]   MIR2117HG [ SEEK ]   MIR2117HG [ MEM ]
Gene Expression Viewer (FireBrowse)MIR2117HG [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)106660605
GTEX Portal (Tissue expression)MIR2117HG
Human Protein AtlasENSG00000267151-MIR2117HG [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR2117HG
DMDM Disease mutations106660605
Blocks (Seattle)MIR2117HG
Human Protein Atlas [tissue]ENSG00000267151-MIR2117HG [tissue]
Protein Interaction databases
FunCoupENSG00000267151
BioGRIDMIR2117HG
STRING (EMBL)MIR2117HG
ZODIACMIR2117HG
Ontologies - Pathways
Huge Navigator MIR2117HG [HugePedia]
snp3D : Map Gene to Disease106660605
BioCentury BCIQMIR2117HG
ClinGenMIR2117HG
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD106660605
Clinical trialMIR2117HG
Miscellaneous
canSAR (ICR)MIR2117HG (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR2117HG
EVEXMIR2117HG
GoPubMedMIR2117HG
iHOPMIR2117HG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:36:03 CET 2017

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