Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR216A (microRNA 216a)

Identity

Alias_namesMIRN216
MIRN216A
microRNA 216
Alias_symbol (synonym)hsa-mir-216
hsa-mir-216a
Other aliasMIR216
miRNA216
mir-216
mir-216a
HGNC (Hugo) MIR216A
LocusID (NCBI) 406998
Atlas_Id 52914
Location 2p16.1  [Link to chromosome band 2p16]
Location_base_pair Starts at 55988950 and ends at 55989059 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR216A   31593
Cards
Entrez_Gene (NCBI)MIR216A  406998  microRNA 216a
AliasesMIR216; MIRN216; MIRN216A; miRNA216; 
mir-216; mir-216a
GeneCards (Weizmann)MIR216A
Ensembl hg19 (Hinxton)ENSG00000207798 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207798 [Gene_View]  chr2:55988950-55989059 [Contig_View]  MIR216A [Vega]
ICGC DataPortalENSG00000207798
TCGA cBioPortalMIR216A
AceView (NCBI)MIR216A
Genatlas (Paris)MIR216A
WikiGenes406998
SOURCE (Princeton)MIR216A
Genetics Home Reference (NIH)MIR216A
miRBaseMIR216A
dbDEMCMIR216A
Genomic and cartography
GoldenPath hg38 (UCSC)MIR216A  -     chr2:55988950-55989059 -  2p16.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR216A  -     2p16.1   [Description]    (hg19-Feb_2009)
EnsemblMIR216A - 2p16.1 [CytoView hg19]  MIR216A - 2p16.1 [CytoView hg38]
Mapping of homologs : NCBIMIR216A [Mapview hg19]  MIR216A [Mapview hg38]
OMIM610944   
Gene and transcription
Genbank (Entrez)AJ550419 LM608361
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR216A
Alternative Splicing GalleryENSG00000207798
Gene ExpressionMIR216A [ NCBI-GEO ]   MIR216A [ EBI - ARRAY_EXPRESS ]   MIR216A [ SEEK ]   MIR216A [ MEM ]
Gene Expression Viewer (FireBrowse)MIR216A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)406998
GTEX Portal (Tissue expression)MIR216A
Human Protein AtlasENSG00000207798-MIR216A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR216A
DMDM Disease mutations406998
Blocks (Seattle)MIR216A
Human Protein Atlas [tissue]ENSG00000207798-MIR216A [tissue]
Protein Interaction databases
FunCoupENSG00000207798
BioGRIDMIR216A
STRING (EMBL)MIR216A
ZODIACMIR216A
Ontologies - Pathways
Huge Navigator MIR216A [HugePedia]
snp3D : Map Gene to Disease406998
BioCentury BCIQMIR216A
ClinGenMIR216A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD406998
Chemical/Pharm GKB GenePA164722598
Clinical trialMIR216A
Miscellaneous
canSAR (ICR)MIR216A (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR216A
EVEXMIR216A
GoPubMedMIR216A
iHOPMIR216A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:23:01 CET 2017

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