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MIR219A1 (microRNA 219a-1)

Identity

Alias_namesMIRN219-1
MIR219-1
microRNA 219-1
Alias_symbol (synonym)hsa-mir-219-1
Other aliasMRI219-1
hsa-mir-219a-1
mir-219
mir-219a-1
HGNC (Hugo) MIR219A1
LocusID (NCBI) 407002
Atlas_Id 53838
Location 6p21.32  [Link to chromosome band 6p21]
Location_base_pair Starts at 33207835 and ends at 33207944 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR219A1   31597
Cards
Entrez_Gene (NCBI)MIR219A1  407002  microRNA 219a-1
AliasesMIR219-1; MIRN219-1; MRI219-1; hsa-mir-219a-1; 
mir-219; mir-219a-1
GeneCards (Weizmann)MIR219A1
Ensembl hg19 (Hinxton)ENSG00000199036 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000199036 [Gene_View]  ENSG00000199036 [Sequence]  chr6:33207835-33207944 [Contig_View]  MIR219A1 [Vega]
ICGC DataPortalENSG00000199036
TCGA cBioPortalMIR219A1
AceView (NCBI)MIR219A1
Genatlas (Paris)MIR219A1
WikiGenes407002
SOURCE (Princeton)MIR219A1
Genetics Home Reference (NIH)MIR219A1
miRBaseMIR219A1
dbDEMCMIR219A1
Genomic and cartography
GoldenPath hg38 (UCSC)MIR219A1  -     chr6:33207835-33207944 +  6p21.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR219A1  -     6p21.32   [Description]    (hg19-Feb_2009)
EnsemblMIR219A1 - 6p21.32 [CytoView hg19]  MIR219A1 - 6p21.32 [CytoView hg38]
Mapping of homologs : NCBIMIR219A1 [Mapview hg19]  MIR219A1 [Mapview hg38]
OMIM611500   
Gene and transcription
Genbank (Entrez)AJ550423 LM608365
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000006 NT_113891 NT_167245 NT_167246 NT_167247 NT_167248
Consensus coding sequences : CCDS (NCBI)MIR219A1
Alternative Splicing GalleryENSG00000199036
Gene ExpressionMIR219A1 [ NCBI-GEO ]   MIR219A1 [ EBI - ARRAY_EXPRESS ]   MIR219A1 [ SEEK ]   MIR219A1 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR219A1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)407002
GTEX Portal (Tissue expression)MIR219A1
Human Protein AtlasENSG00000199036-MIR219A1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR219A1
DMDM Disease mutations407002
Blocks (Seattle)MIR219A1
Human Protein Atlas [tissue]ENSG00000199036-MIR219A1 [tissue]
Protein Interaction databases
FunCoupENSG00000199036
BioGRIDMIR219A1
STRING (EMBL)MIR219A1
ZODIACMIR219A1
Ontologies - Pathways
Huge Navigator MIR219A1 [HugePedia]
snp3D : Map Gene to Disease407002
BioCentury BCIQMIR219A1
ClinGenMIR219A1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD407002
Chemical/Pharm GKB GenePA164722603
Clinical trialMIR219A1
Miscellaneous
canSAR (ICR)MIR219A1 (select the gene name)
Probes
Litterature
PubMed33 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR219A1
EVEXMIR219A1
GoPubMedMIR219A1
iHOPMIR219A1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 6 11:20:58 CET 2018

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