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MIR28 (microRNA 28)

Identity

Alias_namesMIRN28
Alias_symbol (synonym)hsa-mir-28
Other aliasmiR-28
HGNC (Hugo) MIR28
LocusID (NCBI) 407020
Atlas_Id 52361
Location 3q28  [Link to chromosome band 3q28]
Location_base_pair Starts at 188688781 and ends at 188688866 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR28   31615
Cards
Entrez_Gene (NCBI)MIR28  407020  microRNA 28
AliasesMIRN28; hsa-mir-28; miR-28
GeneCards (Weizmann)MIR28
Ensembl hg19 (Hinxton)ENSG00000207651 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207651 [Gene_View]  chr3:188688781-188688866 [Contig_View]  MIR28 [Vega]
ICGC DataPortalENSG00000207651
TCGA cBioPortalMIR28
AceView (NCBI)MIR28
Genatlas (Paris)MIR28
WikiGenes407020
SOURCE (Princeton)MIR28
Genetics Home Reference (NIH)MIR28
miRBaseMIR28
dbDEMCMIR28
Genomic and cartography
GoldenPath hg38 (UCSC)MIR28  -     chr3:188688781-188688866 +  3q28   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR28  -     3q28   [Description]    (hg19-Feb_2009)
EnsemblMIR28 - 3q28 [CytoView hg19]  MIR28 - 3q28 [CytoView hg38]
Mapping of homologs : NCBIMIR28 [Mapview hg19]  MIR28 [Mapview hg38]
OMIM612154   
Gene and transcription
Genbank (Entrez)AJ421750
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR28
Alternative Splicing GalleryENSG00000207651
Gene ExpressionMIR28 [ NCBI-GEO ]   MIR28 [ EBI - ARRAY_EXPRESS ]   MIR28 [ SEEK ]   MIR28 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR28 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)407020
GTEX Portal (Tissue expression)MIR28
Human Protein AtlasENSG00000207651-MIR28 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR28
DMDM Disease mutations407020
Blocks (Seattle)MIR28
Human Protein Atlas [tissue]ENSG00000207651-MIR28 [tissue]
Protein Interaction databases
FunCoupENSG00000207651
BioGRIDMIR28
STRING (EMBL)MIR28
ZODIACMIR28
Ontologies - Pathways
Huge Navigator MIR28 [HugePedia]
snp3D : Map Gene to Disease407020
BioCentury BCIQMIR28
ClinGenMIR28
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD407020
Chemical/Pharm GKB GenePA164722623
Clinical trialMIR28
Miscellaneous
canSAR (ICR)MIR28 (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR28
EVEXMIR28
GoPubMedMIR28
iHOPMIR28
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:23:05 CET 2017

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