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MIR30C1 (microRNA 30c-1)

Identity

Alias_namesMIRN30C1
Alias_symbol (synonym)hsa-mir-30c-1
Other aliasmir-30c-1
HGNC (Hugo) MIR30C1
LocusID (NCBI) 407031
Atlas_Id 52245
Location 1p34.2  [Link to chromosome band 1p34]
Location_base_pair Starts at 40757284 and ends at 40757372 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR30C1   31626
Cards
Entrez_Gene (NCBI)MIR30C1  407031  microRNA 30c-1
AliasesMIRN30C1; mir-30c-1
GeneCards (Weizmann)MIR30C1
Ensembl hg19 (Hinxton)ENSG00000207962 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207962 [Gene_View]  chr1:40757284-40757372 [Contig_View]  MIR30C1 [Vega]
ICGC DataPortalENSG00000207962
TCGA cBioPortalMIR30C1
AceView (NCBI)MIR30C1
Genatlas (Paris)MIR30C1
WikiGenes407031
SOURCE (Princeton)MIR30C1
Genetics Home Reference (NIH)MIR30C1
miRBaseMIR30C1
dbDEMCMIR30C1
Genomic and cartography
GoldenPath hg38 (UCSC)MIR30C1  -     chr1:40757284-40757372 +  1p34.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR30C1  -     1p34.2   [Description]    (hg19-Feb_2009)
EnsemblMIR30C1 - 1p34.2 [CytoView hg19]  MIR30C1 - 1p34.2 [CytoView hg38]
Mapping of homologs : NCBIMIR30C1 [Mapview hg19]  MIR30C1 [Mapview hg38]
OMIM615151   
Gene and transcription
Genbank (Entrez)LM608663
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR30C1
Alternative Splicing GalleryENSG00000207962
Gene ExpressionMIR30C1 [ NCBI-GEO ]   MIR30C1 [ EBI - ARRAY_EXPRESS ]   MIR30C1 [ SEEK ]   MIR30C1 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR30C1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)407031
GTEX Portal (Tissue expression)MIR30C1
Human Protein AtlasENSG00000207962-MIR30C1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR30C1
DMDM Disease mutations407031
Blocks (Seattle)MIR30C1
Human Protein Atlas [tissue]ENSG00000207962-MIR30C1 [tissue]
Protein Interaction databases
FunCoupENSG00000207962
BioGRIDMIR30C1
STRING (EMBL)MIR30C1
ZODIACMIR30C1
Ontologies - Pathways
Huge Navigator MIR30C1 [HugePedia]
snp3D : Map Gene to Disease407031
BioCentury BCIQMIR30C1
ClinGenMIR30C1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD407031
Chemical/Pharm GKB GenePA164722643
Clinical trialMIR30C1
Miscellaneous
canSAR (ICR)MIR30C1 (select the gene name)
Probes
Litterature
PubMed37 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR30C1
EVEXMIR30C1
GoPubMedMIR30C1
iHOPMIR30C1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 20:46:38 CET 2017

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