Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR3130-2 (microRNA 3130-2)

Identity

Alias_namesMIR3130-4
microRNA 3130-4
Alias_symbol (synonym)hsa-mir-3130-2
hsa-mir-3130-4
Other aliasmir-3130-2
HGNC (Hugo) MIR3130-2
LocusID (NCBI) 100423002
Atlas_Id 69155
Location 2q33.3  [Link to chromosome band 2q33]
Location_base_pair Starts at 206783234 and ends at 206783308 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR3130-2   38363
Cards
Entrez_Gene (NCBI)MIR3130-2  100423002  microRNA 3130-2
AliasesMIR3130-4; mir-3130-2
GeneCards (Weizmann)MIR3130-2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:206783234-206783308 [Contig_View]  MIR3130-2 [Vega]
TCGA cBioPortalMIR3130-2
AceView (NCBI)MIR3130-2
Genatlas (Paris)MIR3130-2
WikiGenes100423002
SOURCE (Princeton)MIR3130-2
Genetics Home Reference (NIH)MIR3130-2
miRBaseMIR3130-2
dbDEMCMIR3130-2
Genomic and cartography
GoldenPath hg38 (UCSC)MIR3130-2  -     chr2:206783234-206783308 +  2q33.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR3130-2  -     2q33.3   [Description]    (hg19-Feb_2009)
EnsemblMIR3130-2 - 2q33.3 [CytoView hg19]  MIR3130-2 - 2q33.3 [CytoView hg38]
Mapping of homologs : NCBIMIR3130-2 [Mapview hg19]  MIR3130-2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM610978
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR3130-2
Gene ExpressionMIR3130-2 [ NCBI-GEO ]   MIR3130-2 [ EBI - ARRAY_EXPRESS ]   MIR3130-2 [ SEEK ]   MIR3130-2 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR3130-2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100423002
GTEX Portal (Tissue expression)MIR3130-2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR3130-2
DMDM Disease mutations100423002
Blocks (Seattle)MIR3130-2
Protein Interaction databases
BioGRIDMIR3130-2
STRING (EMBL)MIR3130-2
ZODIACMIR3130-2
Ontologies - Pathways
Huge Navigator MIR3130-2 [HugePedia]
snp3D : Map Gene to Disease100423002
BioCentury BCIQMIR3130-2
ClinGenMIR3130-2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100423002
Chemical/Pharm GKB GenePA165696812
Clinical trialMIR3130-2
Miscellaneous
canSAR (ICR)MIR3130-2 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR3130-2
EVEXMIR3130-2
GoPubMedMIR3130-2
iHOPMIR3130-2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Nov 21 13:05:29 CET 2017

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