Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR3135B (microRNA 3135b)

Identity

Alias_symbol (synonym)hsa-mir-3135b
Other alias-
HGNC (Hugo) MIR3135B
LocusID (NCBI) 100616218
Atlas_Id 77609
Location 6p21.32  [Link to chromosome band 6p21]
Location_base_pair Starts at 32749912 and ends at 32749979 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR3135B   41783
Cards
Entrez_Gene (NCBI)MIR3135B  100616218  microRNA 3135b
Aliases
GeneCards (Weizmann)MIR3135B
Ensembl hg19 (Hinxton)ENSG00000263649 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000263649 [Gene_View]  ENSG00000263649 [Sequence]  chr6:32749912-32749979 [Contig_View]  MIR3135B [Vega]
ICGC DataPortalENSG00000263649
TCGA cBioPortalMIR3135B
AceView (NCBI)MIR3135B
Genatlas (Paris)MIR3135B
WikiGenes100616218
SOURCE (Princeton)MIR3135B
Genetics Home Reference (NIH)MIR3135B
miRBaseMIR3135B
dbDEMCMIR3135B
Genomic and cartography
GoldenPath hg38 (UCSC)MIR3135B  -     chr6:32749912-32749979 -  6p21.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR3135B  -     6p21.32   [Description]    (hg19-Feb_2009)
EnsemblMIR3135B - 6p21.32 [CytoView hg19]  MIR3135B - 6p21.32 [CytoView hg38]
Mapping of homologs : NCBIMIR3135B [Mapview hg19]  MIR3135B [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000006 NC_018917 NT_113891 NT_167244 NT_167245 NT_167246 NT_167247 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)MIR3135B
Alternative Splicing GalleryENSG00000263649
Gene ExpressionMIR3135B [ NCBI-GEO ]   MIR3135B [ EBI - ARRAY_EXPRESS ]   MIR3135B [ SEEK ]   MIR3135B [ MEM ]
Gene Expression Viewer (FireBrowse)MIR3135B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100616218
GTEX Portal (Tissue expression)MIR3135B
Human Protein AtlasENSG00000263649-MIR3135B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR3135B
DMDM Disease mutations100616218
Blocks (Seattle)MIR3135B
Human Protein Atlas [tissue]ENSG00000263649-MIR3135B [tissue]
Protein Interaction databases
FunCoupENSG00000263649
BioGRIDMIR3135B
STRING (EMBL)MIR3135B
ZODIACMIR3135B
Ontologies - Pathways
Huge Navigator MIR3135B [HugePedia]
snp3D : Map Gene to Disease100616218
BioCentury BCIQMIR3135B
ClinGenMIR3135B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100616218
Clinical trialMIR3135B
Miscellaneous
canSAR (ICR)MIR3135B (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR3135B
EVEXMIR3135B
GoPubMedMIR3135B
iHOPMIR3135B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:13:33 CEST 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.