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MIR3139 (microRNA 3139)

Identity

Alias (NCBI)-
HGNC (Hugo) MIR3139
HGNC Alias symbhsa-mir-3139
LocusID (NCBI) 100423017
Atlas_Id 76621
Location 4q31.21  [Link to chromosome band 4q31]
Location_base_pair Starts at 143343460 and ends at 143343535 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR3139   38201
Cards
Entrez_Gene (NCBI)MIR3139  100423017  microRNA 3139
Aliases
GeneCards (Weizmann)MIR3139
Ensembl hg19 (Hinxton)ENSG00000265623 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265623 [Gene_View]  ENSG00000265623 [Sequence]  chr4:143343460-143343535 [Contig_View]  MIR3139 [Vega]
ICGC DataPortalENSG00000265623
TCGA cBioPortalMIR3139
AceView (NCBI)MIR3139
Genatlas (Paris)MIR3139
WikiGenes100423017
SOURCE (Princeton)MIR3139
Genetics Home Reference (NIH)MIR3139
miRBaseMIR3139
dbDEMCMIR3139
Genomic and cartography
GoldenPath hg38 (UCSC)MIR3139  -     chr4:143343460-143343535 +  4q31.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR3139  -     4q31.21   [Description]    (hg19-Feb_2009)
GoldenPathMIR3139 - 4q31.21 [CytoView hg19]  MIR3139 - 4q31.21 [CytoView hg38]
ImmunoBaseENSG00000265623
genome Data Viewer NCBIMIR3139 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR3139
Alternative Splicing GalleryENSG00000265623
Gene ExpressionMIR3139 [ NCBI-GEO ]   MIR3139 [ EBI - ARRAY_EXPRESS ]   MIR3139 [ SEEK ]   MIR3139 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR3139 [ Firebrowse - Broad ]
GenevisibleExpression of MIR3139 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100423017
GTEX Portal (Tissue expression)MIR3139
Human Protein AtlasENSG00000265623-MIR3139 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR3139
DMDM Disease mutations100423017
Blocks (Seattle)MIR3139
Human Protein Atlas [tissue]ENSG00000265623-MIR3139 [tissue]
Protein Interaction databases
FunCoupENSG00000265623
BioGRIDMIR3139
STRING (EMBL)MIR3139
ZODIACMIR3139
Ontologies - Pathways
Huge Navigator MIR3139 [HugePedia]
snp3D : Map Gene to Disease100423017
BioCentury BCIQMIR3139
ClinGenMIR3139
Clinical trials, drugs, therapy
Protein Interactions : CTD100423017
Pharm GKB GenePA165664220
Clinical trialMIR3139
Miscellaneous
canSAR (ICR)MIR3139 (select the gene name)
HarmonizomeMIR3139
DataMed IndexMIR3139
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR3139
EVEXMIR3139
GoPubMedMIR3139
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Aug 22 19:25:09 CEST 2020

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