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MIR3143 (microRNA 3143)

Identity

Alias (NCBI)mir-3143
HGNC (Hugo) MIR3143
HGNC Alias symbhsa-mir-3143
LocusID (NCBI) 100422934
Atlas_Id 69163
Location 6p22.1  [Link to chromosome band 6p22]
Location_base_pair Starts at 27147626 and ends at 27147688 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)MIR3143   38284
Cards
Entrez_Gene (NCBI)MIR3143    microRNA 3143
Aliasesmir-3143
GeneCards (Weizmann)MIR3143
Ensembl hg19 (Hinxton)ENSG00000265565 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265565 [Gene_View]  ENSG00000265565 [Sequence]  chr6:27147626-27147688 [Contig_View]  MIR3143 [Vega]
ICGC DataPortalENSG00000265565
TCGA cBioPortalMIR3143
AceView (NCBI)MIR3143
Genatlas (Paris)MIR3143
SOURCE (Princeton)MIR3143
Genetics Home Reference (NIH)MIR3143
miRBaseMIR3143
dbDEMCMIR3143
Genomic and cartography
GoldenPath hg38 (UCSC)MIR3143  -     chr6:27147626-27147688 +  6p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR3143  -     6p22.1   [Description]    (hg19-Feb_2009)
GoldenPathMIR3143 - 6p22.1 [CytoView hg19]  MIR3143 - 6p22.1 [CytoView hg38]
ImmunoBaseENSG00000265565
genome Data Viewer NCBIMIR3143 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)LM610993
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR3143
Alternative Splicing GalleryENSG00000265565
Gene ExpressionMIR3143 [ NCBI-GEO ]   MIR3143 [ EBI - ARRAY_EXPRESS ]   MIR3143 [ SEEK ]   MIR3143 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR3143 [ Firebrowse - Broad ]
GenevisibleExpression of MIR3143 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100422934
GTEX Portal (Tissue expression)MIR3143
Human Protein AtlasENSG00000265565-MIR3143 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR3143
Blocks (Seattle)MIR3143
Human Protein Atlas [tissue]ENSG00000265565-MIR3143 [tissue]
Protein Interaction databases
BioGRIDMIR3143
STRING (EMBL)MIR3143
ZODIACMIR3143
Ontologies - Pathways
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR3143
EVEXMIR3143
GoPubMedMIR3143
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:13:47 CET 2020

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