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MIR3143 (microRNA 3143)

Identity

Alias_symbol (synonym)hsa-mir-3143
Other aliasmir-3143
HGNC (Hugo) MIR3143
LocusID (NCBI) 100422934
Atlas_Id 69163
Location 6p22.1  [Link to chromosome band 6p22]
Location_base_pair Starts at 27147626 and ends at 27147688 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR3143   38284
Cards
Entrez_Gene (NCBI)MIR3143  100422934  microRNA 3143
Aliasesmir-3143
GeneCards (Weizmann)MIR3143
Ensembl hg19 (Hinxton)ENSG00000265565 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265565 [Gene_View]  ENSG00000265565 [Sequence]  chr6:27147626-27147688 [Contig_View]  MIR3143 [Vega]
ICGC DataPortalENSG00000265565
TCGA cBioPortalMIR3143
AceView (NCBI)MIR3143
Genatlas (Paris)MIR3143
WikiGenes100422934
SOURCE (Princeton)MIR3143
Genetics Home Reference (NIH)MIR3143
miRBaseMIR3143
dbDEMCMIR3143
Genomic and cartography
GoldenPath hg38 (UCSC)MIR3143  -     chr6:27147626-27147688 +  6p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR3143  -     6p22.1   [Description]    (hg19-Feb_2009)
EnsemblMIR3143 - 6p22.1 [CytoView hg19]  MIR3143 - 6p22.1 [CytoView hg38]
Mapping of homologs : NCBIMIR3143 [Mapview hg19]  MIR3143 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM610993
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR3143
Alternative Splicing GalleryENSG00000265565
Gene ExpressionMIR3143 [ NCBI-GEO ]   MIR3143 [ EBI - ARRAY_EXPRESS ]   MIR3143 [ SEEK ]   MIR3143 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR3143 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100422934
GTEX Portal (Tissue expression)MIR3143
Human Protein AtlasENSG00000265565-MIR3143 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR3143
DMDM Disease mutations100422934
Blocks (Seattle)MIR3143
Human Protein Atlas [tissue]ENSG00000265565-MIR3143 [tissue]
Protein Interaction databases
FunCoupENSG00000265565
BioGRIDMIR3143
STRING (EMBL)MIR3143
ZODIACMIR3143
Ontologies - Pathways
Huge Navigator MIR3143 [HugePedia]
snp3D : Map Gene to Disease100422934
BioCentury BCIQMIR3143
ClinGenMIR3143
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100422934
Chemical/Pharm GKB GenePA165618091
Clinical trialMIR3143
Miscellaneous
canSAR (ICR)MIR3143 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR3143
EVEXMIR3143
GoPubMedMIR3143
iHOPMIR3143
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:13:34 CEST 2018

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