Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR3144 (microRNA 3144)

Identity

Alias_symbol (synonym)hsa-mir-3144
Other aliasmir-3144
HGNC (Hugo) MIR3144
LocusID (NCBI) 100422951
Atlas_Id 55736
Location 6q22.31  [Link to chromosome band 6q22]
Location_base_pair Starts at 120015179 and ends at 120015257 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR3144   38331
Cards
Entrez_Gene (NCBI)MIR3144  100422951  microRNA 3144
Aliasesmir-3144
GeneCards (Weizmann)MIR3144
Ensembl hg19 (Hinxton)ENSG00000265725 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265725 [Gene_View]  ENSG00000265725 [Sequence]  chr6:120015179-120015257 [Contig_View]  MIR3144 [Vega]
ICGC DataPortalENSG00000265725
TCGA cBioPortalMIR3144
AceView (NCBI)MIR3144
Genatlas (Paris)MIR3144
WikiGenes100422951
SOURCE (Princeton)MIR3144
Genetics Home Reference (NIH)MIR3144
miRBaseMIR3144
dbDEMCMIR3144
Genomic and cartography
GoldenPath hg38 (UCSC)MIR3144  -     chr6:120015179-120015257 +  6q22.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR3144  -     6q22.31   [Description]    (hg19-Feb_2009)
EnsemblMIR3144 - 6q22.31 [CytoView hg19]  MIR3144 - 6q22.31 [CytoView hg38]
Mapping of homologs : NCBIMIR3144 [Mapview hg19]  MIR3144 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM610995
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR3144
Alternative Splicing GalleryENSG00000265725
Gene ExpressionMIR3144 [ NCBI-GEO ]   MIR3144 [ EBI - ARRAY_EXPRESS ]   MIR3144 [ SEEK ]   MIR3144 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR3144 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100422951
GTEX Portal (Tissue expression)MIR3144
Human Protein AtlasENSG00000265725-MIR3144 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR3144
DMDM Disease mutations100422951
Blocks (Seattle)MIR3144
Human Protein Atlas [tissue]ENSG00000265725-MIR3144 [tissue]
Protein Interaction databases
FunCoupENSG00000265725
BioGRIDMIR3144
STRING (EMBL)MIR3144
ZODIACMIR3144
Ontologies - Pathways
Huge Navigator MIR3144 [HugePedia]
snp3D : Map Gene to Disease100422951
BioCentury BCIQMIR3144
ClinGenMIR3144
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100422951
Chemical/Pharm GKB GenePA165618101
Clinical trialMIR3144
Miscellaneous
canSAR (ICR)MIR3144 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR3144
EVEXMIR3144
GoPubMedMIR3144
iHOPMIR3144
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 6 11:21:12 CET 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.