Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR3160-1 (microRNA 3160-1)

Identity

Alias (NCBI)mir-3160-1
HGNC (Hugo) MIR3160-1
HGNC Alias symbhsa-mir-3160-1
LocusID (NCBI) 100422827
Atlas_Id 69182
Location 11p11.2  [Link to chromosome band 11p11]
Location_base_pair Starts at 46451805 and ends at 46451889 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR3160-1   38197
Cards
Entrez_Gene (NCBI)MIR3160-1  100422827  microRNA 3160-1
Aliasesmir-3160-1
GeneCards (Weizmann)MIR3160-1
Ensembl hg19 (Hinxton)ENSG00000265014 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265014 [Gene_View]  ENSG00000265014 [Sequence]  chr11:46451805-46451889 [Contig_View]  MIR3160-1 [Vega]
ICGC DataPortalENSG00000265014
TCGA cBioPortalMIR3160-1
AceView (NCBI)MIR3160-1
Genatlas (Paris)MIR3160-1
WikiGenes100422827
SOURCE (Princeton)MIR3160-1
Genetics Home Reference (NIH)MIR3160-1
miRBaseMIR3160-1
dbDEMCMIR3160-1
Genomic and cartography
GoldenPath hg38 (UCSC)MIR3160-1  -     chr11:46451805-46451889 -  11p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR3160-1  -     11p11.2   [Description]    (hg19-Feb_2009)
GoldenPathMIR3160-1 - 11p11.2 [CytoView hg19]  MIR3160-1 - 11p11.2 [CytoView hg38]
ImmunoBaseENSG00000265014
genome Data Viewer NCBIMIR3160-1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)LM611014
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR3160-1
Alternative Splicing GalleryENSG00000265014
Gene ExpressionMIR3160-1 [ NCBI-GEO ]   MIR3160-1 [ EBI - ARRAY_EXPRESS ]   MIR3160-1 [ SEEK ]   MIR3160-1 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR3160-1 [ Firebrowse - Broad ]
GenevisibleExpression of MIR3160-1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100422827
GTEX Portal (Tissue expression)MIR3160-1
Human Protein AtlasENSG00000265014-MIR3160-1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR3160-1
DMDM Disease mutations100422827
Blocks (Seattle)MIR3160-1
Human Protein Atlas [tissue]ENSG00000265014-MIR3160-1 [tissue]
Protein Interaction databases
FunCoupENSG00000265014
BioGRIDMIR3160-1
STRING (EMBL)MIR3160-1
ZODIACMIR3160-1
Ontologies - Pathways
Huge Navigator MIR3160-1 [HugePedia]
snp3D : Map Gene to Disease100422827
BioCentury BCIQMIR3160-1
ClinGenMIR3160-1
Clinical trials, drugs, therapy
Protein Interactions : CTD100422827
Pharm GKB GenePA165543465
Clinical trialMIR3160-1
Miscellaneous
canSAR (ICR)MIR3160-1 (select the gene name)
HarmonizomeMIR3160-1
DataMed IndexMIR3160-1
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR3160-1
EVEXMIR3160-1
GoPubMedMIR3160-1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Aug 22 19:25:12 CEST 2020

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