Atlas of Genetics and Cytogenetics in Oncology and Haematology

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MIR3165 (microRNA 3165)

Identity

Alias_symbol (synonym)hsa-mir-3165
Other aliasmir-3165
HGNC (Hugo) MIR3165
LocusID (NCBI) 100422953
Atlas_Id 69185
Location 11q13.4  [Link to chromosome band 11q13]
Location_base_pair Starts at 72072228 and ends at 72072302 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MIR3165   38335
Cards
Entrez_Gene (NCBI)MIR3165  100422953  microRNA 3165
Aliasesmir-3165
GeneCards (Weizmann)MIR3165
Ensembl hg19 (Hinxton)ENSG00000263742 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000263742 [Gene_View]  ENSG00000263742 [Sequence]  chr11:72072228-72072302 [Contig_View]  MIR3165 [Vega]
ICGC DataPortalENSG00000263742
TCGA cBioPortalMIR3165
AceView (NCBI)MIR3165
Genatlas (Paris)MIR3165
WikiGenes100422953
SOURCE (Princeton)MIR3165
Genetics Home Reference (NIH)MIR3165
miRBaseMIR3165
dbDEMCMIR3165
Genomic and cartography
GoldenPath hg38 (UCSC)MIR3165  -     chr11:72072228-72072302 -  11q13.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR3165  -     11q13.4   [Description]    (hg19-Feb_2009)
GoldenPathMIR3165 - 11q13.4 [CytoView hg19]  MIR3165 - 11q13.4 [CytoView hg38]
ImmunoBaseENSG00000263742
Mapping of homologs : NCBIMIR3165 [Mapview hg19]  MIR3165 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM611020
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR3165
Alternative Splicing GalleryENSG00000263742
Gene ExpressionMIR3165 [ NCBI-GEO ]   MIR3165 [ EBI - ARRAY_EXPRESS ]   MIR3165 [ SEEK ]   MIR3165 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR3165 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100422953
GTEX Portal (Tissue expression)MIR3165
Human Protein AtlasENSG00000263742-MIR3165 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR3165
DMDM Disease mutations100422953
Blocks (Seattle)MIR3165
Human Protein Atlas [tissue]ENSG00000263742-MIR3165 [tissue]
Protein Interaction databases
FunCoupENSG00000263742
BioGRIDMIR3165
STRING (EMBL)MIR3165
ZODIACMIR3165
Ontologies - Pathways
Huge Navigator MIR3165 [HugePedia]
snp3D : Map Gene to Disease100422953
BioCentury BCIQMIR3165
ClinGenMIR3165
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100422953
Chemical/Pharm GKB GenePA165543471
Clinical trialMIR3165
Miscellaneous
canSAR (ICR)MIR3165 (select the gene name)
DataMed IndexMIR3165
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR3165
EVEXMIR3165
GoPubMedMIR3165
iHOPMIR3165
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Feb 19 17:52:12 CET 2020
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