Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR3179-4 (microRNA 3179-4)

Identity

Other aliashsa-mir-3179-4
HGNC (Hugo) MIR3179-4
LocusID (NCBI) 103504729
Atlas_Id 77031
Location 16p13.11  [Link to chromosome band 16p13]
Location_base_pair Starts at 14901508 and ends at 14901591 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR3179-4   50838
Cards
Entrez_Gene (NCBI)MIR3179-4  103504729  microRNA 3179-4
Aliaseshsa-mir-3179-4
GeneCards (Weizmann)MIR3179-4
Ensembl hg19 (Hinxton)ENSG00000277014 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000277014 [Gene_View]  chr16:14901508-14901591 [Contig_View]  MIR3179-4 [Vega]
ICGC DataPortalENSG00000277014
TCGA cBioPortalMIR3179-4
AceView (NCBI)MIR3179-4
Genatlas (Paris)MIR3179-4
WikiGenes103504729
SOURCE (Princeton)MIR3179-4
Genetics Home Reference (NIH)MIR3179-4
miRBaseMIR3179-4
dbDEMCMIR3179-4
Genomic and cartography
GoldenPath hg38 (UCSC)MIR3179-4  -     chr16:14901508-14901591 +  16p13.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR3179-4  -     16p13.11   [Description]    (hg19-Feb_2009)
EnsemblMIR3179-4 - 16p13.11 [CytoView hg19]  MIR3179-4 - 16p13.11 [CytoView hg38]
Mapping of homologs : NCBIMIR3179-4 [Mapview hg19]  MIR3179-4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR3179-4
Alternative Splicing GalleryENSG00000277014
Gene ExpressionMIR3179-4 [ NCBI-GEO ]   MIR3179-4 [ EBI - ARRAY_EXPRESS ]   MIR3179-4 [ SEEK ]   MIR3179-4 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR3179-4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)103504729
GTEX Portal (Tissue expression)MIR3179-4
Human Protein AtlasENSG00000277014-MIR3179-4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR3179-4
DMDM Disease mutations103504729
Blocks (Seattle)MIR3179-4
Human Protein Atlas [tissue]ENSG00000277014-MIR3179-4 [tissue]
Protein Interaction databases
FunCoupENSG00000277014
BioGRIDMIR3179-4
STRING (EMBL)MIR3179-4
ZODIACMIR3179-4
Ontologies - Pathways
Huge Navigator MIR3179-4 [HugePedia]
snp3D : Map Gene to Disease103504729
BioCentury BCIQMIR3179-4
ClinGenMIR3179-4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD103504729
Clinical trialMIR3179-4
Miscellaneous
canSAR (ICR)MIR3179-4 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR3179-4
EVEXMIR3179-4
GoPubMedMIR3179-4
iHOPMIR3179-4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:13:34 CET 2017

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