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MIR31HG (MIR31 host gene)

Identity

Other aliashsa-lnc-31
HGNC (Hugo) MIR31HG
LocusID (NCBI) 554202
Atlas_Id 56864
Location 9p21.3  [Link to chromosome band 9p21]
Location_base_pair Starts at 21454268 and ends at 21559698 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ITGA2 (5q11.2) / MIR31HG (9p21.3)MIR31HG (9p21.3) / MIR31HG (9p21.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR31HG   37187
Cards
Entrez_Gene (NCBI)MIR31HG  554202  MIR31 host gene
Aliaseshsa-lnc-31
GeneCards (Weizmann)MIR31HG
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr9:21454268-21559698 [Contig_View]  MIR31HG [Vega]
TCGA cBioPortalMIR31HG
AceView (NCBI)MIR31HG
Genatlas (Paris)MIR31HG
WikiGenes554202
SOURCE (Princeton)MIR31HG
Genetics Home Reference (NIH)MIR31HG
miRBaseMIR31HG
dbDEMCMIR31HG
Genomic and cartography
GoldenPath hg38 (UCSC)MIR31HG  -     chr9:21454268-21559698 -  9p21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR31HG  -     9p21.3   [Description]    (hg19-Feb_2009)
EnsemblMIR31HG - 9p21.3 [CytoView hg19]  MIR31HG - 9p21.3 [CytoView hg38]
Mapping of homologs : NCBIMIR31HG [Mapview hg19]  MIR31HG [Mapview hg38]
OMIM616356   
Gene and transcription
Genbank (Entrez)AK124391 BC011715 BC021861 CA440917
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR31HG
Cluster EST : UnigeneHs.458096 [ NCBI ]
CGAP (NCI)Hs.458096
Gene ExpressionMIR31HG [ NCBI-GEO ]   MIR31HG [ EBI - ARRAY_EXPRESS ]   MIR31HG [ SEEK ]   MIR31HG [ MEM ]
Gene Expression Viewer (FireBrowse)MIR31HG [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)554202
GTEX Portal (Tissue expression)MIR31HG
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR31HG
DMDM Disease mutations554202
Blocks (Seattle)MIR31HG
IPIIPI00102863   
Protein Interaction databases
BioGRIDMIR31HG
STRING (EMBL)MIR31HG
ZODIACMIR31HG
Ontologies - Pathways
Huge Navigator MIR31HG [HugePedia]
snp3D : Map Gene to Disease554202
BioCentury BCIQMIR31HG
ClinGenMIR31HG
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD554202
Clinical trialMIR31HG
Miscellaneous
canSAR (ICR)MIR31HG (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR31HG
EVEXMIR31HG
GoPubMedMIR31HG
iHOPMIR31HG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:23:12 CET 2017

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