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MIR338 (microRNA 338)

Identity

Alias_namesMIRN338
Alias_symbol (synonym)hsa-mir-338
Other aliasmir-338
HGNC (Hugo) MIR338
LocusID (NCBI) 442906
Atlas_Id 53742
Location 17q25.3  [Link to chromosome band 17q25]
Location_base_pair Starts at 79099683 and ends at 79099749 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR338   31775
Cards
Entrez_Gene (NCBI)MIR338  442906  microRNA 338
AliasesMIRN338; hsa-mir-338; mir-338
GeneCards (Weizmann)MIR338
Ensembl hg19 (Hinxton) [Gene_View]  chr17:79099683-79099749 [Contig_View]  MIR338 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:79099683-79099749 [Contig_View]  MIR338 [Vega]
TCGA cBioPortalMIR338
AceView (NCBI)MIR338
Genatlas (Paris)MIR338
WikiGenes442906
SOURCE (Princeton)MIR338
Genetics Home Reference (NIH)MIR338
miRBaseMIR338
dbDEMCMIR338
Genomic and cartography
GoldenPath hg19 (UCSC)MIR338  -     chr17:79099683-79099749 -  17q25.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR338  -     17q25.3   [Description]    (hg38-Dec_2013)
EnsemblMIR338 - 17q25.3 [CytoView hg19]  MIR338 - 17q25.3 [CytoView hg38]
Mapping of homologs : NCBIMIR338 [Mapview hg19]  MIR338 [Mapview hg38]
OMIM614059   
Gene and transcription
Genbank (Entrez)LM608732
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000017 NC_018928 NG_029981 NT_010783 NW_004929407
Consensus coding sequences : CCDS (NCBI)MIR338
Gene ExpressionMIR338 [ NCBI-GEO ]   MIR338 [ EBI - ARRAY_EXPRESS ]   MIR338 [ SEEK ]   MIR338 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR338 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)442906
GTEX Portal (Tissue expression)MIR338
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR338
DMDM Disease mutations442906
Blocks (Seattle)MIR338
Protein Interaction databases
BioGRIDMIR338
STRING (EMBL)MIR338
ZODIACMIR338
Ontologies - Pathways
Huge Navigator MIR338 [HugePedia]
snp3D : Map Gene to Disease442906
BioCentury BCIQMIR338
ClinGenMIR338
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD442906
Chemical/Pharm GKB GenePA164722667
Clinical trialMIR338
Miscellaneous
canSAR (ICR)MIR338 (select the gene name)
Probes
Litterature
PubMed27 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR338
EVEXMIR338
GoPubMedMIR338
iHOPMIR338
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 13:16:01 CET 2017

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