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MIR340 (microRNA 340)

Identity

Other namesMIRN340
hsa-mir-340
HGNC (Hugo) MIR340
LocusID (NCBI) 442908
Location 5q35.3
Location_base_pair Starts at 179442303 and ends at 179442397 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)MIR340   31777
Entrez_Gene (NCBI)MIR340  442908  microRNA 340
Cards
GeneCards (Weizmann)MIR340
Ensembl (Hinxton) [Gene_View]  chr5:179442303-179442397 [Contig_View]  MIR340 [Vega]
AceView (NCBI)MIR340
Genatlas (Paris)MIR340
SOURCE (Stanford)
Genomic and cartography
GoldenPath (UCSC)MIR340  -  5q35.3   chr5:179442303-179442397 -  5q35.3   [Description]    (hg19-Feb_2009)
EnsemblMIR340 - 5q35.3 [CytoView]
Mapping of homologs : NCBIMIR340 [Mapview]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (SRS)
RefSeq transcript (Entrez)
RefSeq genomic (SRS)AC_000137 NC_000005 NC_018916 NT_023133 NW_001838967 NW_004078025
RefSeq genomic (Entrez)AC_000137 NC_000005 NC_018916 NT_023133 NW_001838967 NW_004078025
Consensus coding sequences : CCDS (NCBI)MIR340
Alternative Splicing : Fast-db (Paris)GSHG0042854
Gene ExpressionMIR340 [ NCBI-GEO ]   MIR340 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
Domain families : Pfam (SRS)
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
DMDM442908
Protein Interaction databases
REACTOMEMIR340
Protein Interaction Database442908
BioGRIDMIR340
IntegromeDBMIR340
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)MIR340
SNP (GeneSNP Utah)MIR340
SNP : HGBaseMIR340
Genetic variants : HAPMAPMIR340
Mutations and Diseases : HGMDMIR340
OMIM
GENETests
Disease Genetic AssociationMIR340
Huge Navigator MIR340 [HugePedia]  MIR340 [HugeCancerGEM]
Genomic VariantsMIR340  MIR340 [DGVbeta]
snp3D : Map Gene to Disease442908
General knowledge
Homologs : HomoloGeneMIR340
Homology/Alignments : Family Browser (UCSC)MIR340
Phylogenetic Trees/Animal Genes : TreeFamMIR340
Chemical/Protein Interactions : CTD442908
Chemical/Pharm GKB GenePA164722671
Clinical trialMIR340
Ontology : AmiGO
Ontology : EGO-EBI
Other databases
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
PubGeneMIR340
iHOPMIR340
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:50:50 CEST 2013
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