Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR3616 (microRNA 3616)

Identity

Alias_symbol (synonym)hsa-mir-3616
Other aliasmir-3616
HGNC (Hugo) MIR3616
LocusID (NCBI) 100500814
Atlas_Id 69249
Location 20q13.12  [Link to chromosome band 20q13]
Location_base_pair Starts at 47166967 and ends at 47167058 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR3616   38943
Cards
Entrez_Gene (NCBI)MIR3616  100500814  microRNA 3616
Aliasesmir-3616
GeneCards (Weizmann)MIR3616
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr20:47166967-47167058 [Contig_View]  MIR3616 [Vega]
TCGA cBioPortalMIR3616
AceView (NCBI)MIR3616
Genatlas (Paris)MIR3616
WikiGenes100500814
SOURCE (Princeton)MIR3616
Genetics Home Reference (NIH)MIR3616
miRBaseMIR3616
dbDEMCMIR3616
Genomic and cartography
GoldenPath hg38 (UCSC)MIR3616  -     chr20:47166967-47167058 +  20q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR3616  -     20q13.12   [Description]    (hg19-Feb_2009)
EnsemblMIR3616 - 20q13.12 [CytoView hg19]  MIR3616 - 20q13.12 [CytoView hg38]
Mapping of homologs : NCBIMIR3616 [Mapview hg19]  MIR3616 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM611175
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR3616
Gene ExpressionMIR3616 [ NCBI-GEO ]   MIR3616 [ EBI - ARRAY_EXPRESS ]   MIR3616 [ SEEK ]   MIR3616 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR3616 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100500814
GTEX Portal (Tissue expression)MIR3616
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR3616
DMDM Disease mutations100500814
Blocks (Seattle)MIR3616
Protein Interaction databases
BioGRIDMIR3616
STRING (EMBL)MIR3616
ZODIACMIR3616
Ontologies - Pathways
Huge Navigator MIR3616 [HugePedia]
snp3D : Map Gene to Disease100500814
BioCentury BCIQMIR3616
ClinGenMIR3616
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100500814
Clinical trialMIR3616
Miscellaneous
canSAR (ICR)MIR3616 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR3616
EVEXMIR3616
GoPubMedMIR3616
iHOPMIR3616
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:41:54 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.