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MIR3646 (microRNA 3646)

Identity

Alias_symbol (synonym)hsa-mir-3646
Other alias-
HGNC (Hugo) MIR3646
LocusID (NCBI) 100500813
Atlas_Id 56629
Location 20q13.12  [Link to chromosome band 20q13]
Location_base_pair Starts at 44408120 and ends at 44408203 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR3646   38935
Cards
Entrez_Gene (NCBI)MIR3646  100500813  microRNA 3646
Aliases
GeneCards (Weizmann)MIR3646
Ensembl hg19 (Hinxton)ENSG00000266151 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000266151 [Gene_View]  chr20:44408120-44408203 [Contig_View]  MIR3646 [Vega]
ICGC DataPortalENSG00000266151
TCGA cBioPortalMIR3646
AceView (NCBI)MIR3646
Genatlas (Paris)MIR3646
WikiGenes100500813
SOURCE (Princeton)MIR3646
Genetics Home Reference (NIH)MIR3646
miRBaseMIR3646
dbDEMCMIR3646
Genomic and cartography
GoldenPath hg38 (UCSC)MIR3646  -     chr20:44408120-44408203 +  20q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR3646  -     20q13.12   [Description]    (hg19-Feb_2009)
EnsemblMIR3646 - 20q13.12 [CytoView hg19]  MIR3646 - 20q13.12 [CytoView hg38]
Mapping of homologs : NCBIMIR3646 [Mapview hg19]  MIR3646 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR3646
Alternative Splicing GalleryENSG00000266151
Gene ExpressionMIR3646 [ NCBI-GEO ]   MIR3646 [ EBI - ARRAY_EXPRESS ]   MIR3646 [ SEEK ]   MIR3646 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR3646 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100500813
GTEX Portal (Tissue expression)MIR3646
Human Protein AtlasENSG00000266151-MIR3646 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR3646
DMDM Disease mutations100500813
Blocks (Seattle)MIR3646
Human Protein Atlas [tissue]ENSG00000266151-MIR3646 [tissue]
Protein Interaction databases
FunCoupENSG00000266151
BioGRIDMIR3646
STRING (EMBL)MIR3646
ZODIACMIR3646
Ontologies - Pathways
Huge Navigator MIR3646 [HugePedia]
snp3D : Map Gene to Disease100500813
BioCentury BCIQMIR3646
ClinGenMIR3646
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100500813
Clinical trialMIR3646
Miscellaneous
canSAR (ICR)MIR3646 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR3646
EVEXMIR3646
GoPubMedMIR3646
iHOPMIR3646
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:23:19 CET 2017

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