Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR3650 (microRNA 3650)

Identity

Alias_symbol (synonym)hsa-mir-3650
Other alias-
HGNC (Hugo) MIR3650
LocusID (NCBI) 100500824
Atlas_Id 69259
Location 5p13.1  [Link to chromosome band 5p13]
Location_base_pair Starts at 38557502 and ends at 38557561 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR3650   38981
Cards
Entrez_Gene (NCBI)MIR3650  100500824  microRNA 3650
Aliases
GeneCards (Weizmann)MIR3650
Ensembl hg19 (Hinxton)ENSG00000265304 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265304 [Gene_View]  chr5:38557502-38557561 [Contig_View]  MIR3650 [Vega]
ICGC DataPortalENSG00000265304
TCGA cBioPortalMIR3650
AceView (NCBI)MIR3650
Genatlas (Paris)MIR3650
WikiGenes100500824
SOURCE (Princeton)MIR3650
Genetics Home Reference (NIH)MIR3650
miRBaseMIR3650
dbDEMCMIR3650
Genomic and cartography
GoldenPath hg38 (UCSC)MIR3650  -     chr5:38557502-38557561 -  5p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR3650  -     5p13.1   [Description]    (hg19-Feb_2009)
EnsemblMIR3650 - 5p13.1 [CytoView hg19]  MIR3650 - 5p13.1 [CytoView hg38]
Mapping of homologs : NCBIMIR3650 [Mapview hg19]  MIR3650 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR3650
Alternative Splicing GalleryENSG00000265304
Gene ExpressionMIR3650 [ NCBI-GEO ]   MIR3650 [ EBI - ARRAY_EXPRESS ]   MIR3650 [ SEEK ]   MIR3650 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR3650 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100500824
GTEX Portal (Tissue expression)MIR3650
Human Protein AtlasENSG00000265304-MIR3650 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR3650
DMDM Disease mutations100500824
Blocks (Seattle)MIR3650
Human Protein Atlas [tissue]ENSG00000265304-MIR3650 [tissue]
Protein Interaction databases
FunCoupENSG00000265304
BioGRIDMIR3650
STRING (EMBL)MIR3650
ZODIACMIR3650
Ontologies - Pathways
Huge Navigator MIR3650 [HugePedia]
snp3D : Map Gene to Disease100500824
BioCentury BCIQMIR3650
ClinGenMIR3650
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100500824
Clinical trialMIR3650
Miscellaneous
canSAR (ICR)MIR3650 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR3650
EVEXMIR3650
GoPubMedMIR3650
iHOPMIR3650
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:13:45 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.