Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR3680-1 (microRNA 3680-1)

Identity

Alias_namesMIR3680
microRNA 3680
Alias_symbol (synonym)hsa-mir-3680
Other aliashsa-mir-3680-1
HGNC (Hugo) MIR3680-1
LocusID (NCBI) 100500917
Atlas_Id 69282
Location 16p12.2  [Link to chromosome band 16p12]
Location_base_pair Starts at 21506049 and ends at 21506135 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR3680-1   38989
Cards
Entrez_Gene (NCBI)MIR3680-1  100500917  microRNA 3680-1
AliasesMIR3680; hsa-mir-3680-1
GeneCards (Weizmann)MIR3680-1
Ensembl hg19 (Hinxton)ENSG00000265462 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265462 [Gene_View]  chr16:21506049-21506135 [Contig_View]  MIR3680-1 [Vega]
ICGC DataPortalENSG00000265462
TCGA cBioPortalMIR3680-1
AceView (NCBI)MIR3680-1
Genatlas (Paris)MIR3680-1
WikiGenes100500917
SOURCE (Princeton)MIR3680-1
Genetics Home Reference (NIH)MIR3680-1
miRBaseMIR3680-1
dbDEMCMIR3680-1
Genomic and cartography
GoldenPath hg38 (UCSC)MIR3680-1  -     chr16:21506049-21506135 -  16p12.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR3680-1  -     16p12.2   [Description]    (hg19-Feb_2009)
EnsemblMIR3680-1 - 16p12.2 [CytoView hg19]  MIR3680-1 - 16p12.2 [CytoView hg38]
Mapping of homologs : NCBIMIR3680-1 [Mapview hg19]  MIR3680-1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR3680-1
Alternative Splicing GalleryENSG00000265462
Gene ExpressionMIR3680-1 [ NCBI-GEO ]   MIR3680-1 [ EBI - ARRAY_EXPRESS ]   MIR3680-1 [ SEEK ]   MIR3680-1 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR3680-1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100500917
GTEX Portal (Tissue expression)MIR3680-1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR3680-1
DMDM Disease mutations100500917
Blocks (Seattle)MIR3680-1
Human Protein AtlasENSG00000265462
Protein Interaction databases
FunCoupENSG00000265462
BioGRIDMIR3680-1
STRING (EMBL)MIR3680-1
ZODIACMIR3680-1
Ontologies - Pathways
Huge Navigator MIR3680-1 [HugePedia]
snp3D : Map Gene to Disease100500917
BioCentury BCIQMIR3680-1
ClinGenMIR3680-1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100500917
Clinical trialMIR3680-1
Miscellaneous
canSAR (ICR)MIR3680-1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR3680-1
EVEXMIR3680-1
GoPubMedMIR3680-1
iHOPMIR3680-1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:28:11 CEST 2017

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