Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR3688-1 (microRNA 3688-1)

Identity

Alias_namesMIR3688
microRNA 3688
Alias_symbol (synonym)hsa-mir-3688
hsa-mir-3688-1
Other aliasmir-3688-1
HGNC (Hugo) MIR3688-1
LocusID (NCBI) 100500881
Atlas_Id 69288
Location 4q32.1  [Link to chromosome band 4q32]
Location_base_pair Starts at 159128802 and ends at 159128894 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR3688-1   38986
Cards
Entrez_Gene (NCBI)MIR3688-1  100500881  microRNA 3688-1
AliasesMIR3688; mir-3688-1
GeneCards (Weizmann)MIR3688-1
Ensembl hg19 (Hinxton)ENSG00000264105 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000264105 [Gene_View]  chr4:159128802-159128894 [Contig_View]  MIR3688-1 [Vega]
ICGC DataPortalENSG00000264105
TCGA cBioPortalMIR3688-1
AceView (NCBI)MIR3688-1
Genatlas (Paris)MIR3688-1
WikiGenes100500881
SOURCE (Princeton)MIR3688-1
Genetics Home Reference (NIH)MIR3688-1
miRBaseMIR3688-1
dbDEMCMIR3688-1
Genomic and cartography
GoldenPath hg38 (UCSC)MIR3688-1  -     chr4:159128802-159128894 -  4q32.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR3688-1  -     4q32.1   [Description]    (hg19-Feb_2009)
EnsemblMIR3688-1 - 4q32.1 [CytoView hg19]  MIR3688-1 - 4q32.1 [CytoView hg38]
Mapping of homologs : NCBIMIR3688-1 [Mapview hg19]  MIR3688-1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM611197
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR3688-1
Alternative Splicing GalleryENSG00000264105
Gene ExpressionMIR3688-1 [ NCBI-GEO ]   MIR3688-1 [ EBI - ARRAY_EXPRESS ]   MIR3688-1 [ SEEK ]   MIR3688-1 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR3688-1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100500881
GTEX Portal (Tissue expression)MIR3688-1
Human Protein AtlasENSG00000264105-MIR3688-1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR3688-1
DMDM Disease mutations100500881
Blocks (Seattle)MIR3688-1
Human Protein Atlas [tissue]ENSG00000264105-MIR3688-1 [tissue]
Protein Interaction databases
FunCoupENSG00000264105
BioGRIDMIR3688-1
STRING (EMBL)MIR3688-1
ZODIACMIR3688-1
Ontologies - Pathways
Huge Navigator MIR3688-1 [HugePedia]
snp3D : Map Gene to Disease100500881
BioCentury BCIQMIR3688-1
ClinGenMIR3688-1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100500881
Clinical trialMIR3688-1
Miscellaneous
canSAR (ICR)MIR3688-1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR3688-1
EVEXMIR3688-1
GoPubMedMIR3688-1
iHOPMIR3688-1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:10:30 CET 2017

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