Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR3689D1 (microRNA 3689d-1)

Identity

Alias_symbol (synonym)hsa-mir-3689d-1
Other alias-
HGNC (Hugo) MIR3689D1
LocusID (NCBI) 100616131
Atlas_Id 69293
Location 9q34.3  [Link to chromosome band 9q34]
Location_base_pair Starts at 134849609 and ends at 134849682 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR3689D1   41621
Cards
Entrez_Gene (NCBI)MIR3689D1  100616131  microRNA 3689d-1
Aliases
GeneCards (Weizmann)MIR3689D1
Ensembl hg19 (Hinxton)ENSG00000265848 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265848 [Gene_View]  chr9:134849609-134849682 [Contig_View]  MIR3689D1 [Vega]
ICGC DataPortalENSG00000265848
TCGA cBioPortalMIR3689D1
AceView (NCBI)MIR3689D1
Genatlas (Paris)MIR3689D1
WikiGenes100616131
SOURCE (Princeton)MIR3689D1
Genetics Home Reference (NIH)MIR3689D1
miRBaseMIR3689D1
dbDEMCMIR3689D1
Genomic and cartography
GoldenPath hg38 (UCSC)MIR3689D1  -     chr9:134849609-134849682 -  9q34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR3689D1  -     9q34.3   [Description]    (hg19-Feb_2009)
EnsemblMIR3689D1 - 9q34.3 [CytoView hg19]  MIR3689D1 - 9q34.3 [CytoView hg38]
Mapping of homologs : NCBIMIR3689D1 [Mapview hg19]  MIR3689D1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR3689D1
Alternative Splicing GalleryENSG00000265848
Gene ExpressionMIR3689D1 [ NCBI-GEO ]   MIR3689D1 [ EBI - ARRAY_EXPRESS ]   MIR3689D1 [ SEEK ]   MIR3689D1 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR3689D1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100616131
GTEX Portal (Tissue expression)MIR3689D1
Human Protein AtlasENSG00000265848-MIR3689D1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR3689D1
DMDM Disease mutations100616131
Blocks (Seattle)MIR3689D1
Human Protein Atlas [tissue]ENSG00000265848-MIR3689D1 [tissue]
Protein Interaction databases
FunCoupENSG00000265848
BioGRIDMIR3689D1
STRING (EMBL)MIR3689D1
ZODIACMIR3689D1
Ontologies - Pathways
Huge Navigator MIR3689D1 [HugePedia]
snp3D : Map Gene to Disease100616131
BioCentury BCIQMIR3689D1
ClinGenMIR3689D1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100616131
Clinical trialMIR3689D1
Miscellaneous
canSAR (ICR)MIR3689D1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR3689D1
EVEXMIR3689D1
GoPubMedMIR3689D1
iHOPMIR3689D1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:13:53 CET 2017

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