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MIR378C (microRNA 378c)

Identity

Alias_symbol (synonym)hsa-mir-378c
Other aliasmir-378c
HGNC (Hugo) MIR378C
LocusID (NCBI) 100422867
Atlas_Id 55821
Location 10q26.3  [Link to chromosome band 10q26]
Location_base_pair Starts at 130962588 and ends at 130962668 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR378C   38374
Cards
Entrez_Gene (NCBI)MIR378C  100422867  microRNA 378c
Aliasesmir-378c
GeneCards (Weizmann)MIR378C
Ensembl hg19 (Hinxton)ENSG00000264803 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000264803 [Gene_View]  chr10:130962588-130962668 [Contig_View]  MIR378C [Vega]
ICGC DataPortalENSG00000264803
TCGA cBioPortalMIR378C
AceView (NCBI)MIR378C
Genatlas (Paris)MIR378C
WikiGenes100422867
SOURCE (Princeton)MIR378C
Genetics Home Reference (NIH)MIR378C
miRBaseMIR378C
dbDEMCMIR378C
Genomic and cartography
GoldenPath hg38 (UCSC)MIR378C  -     chr10:130962588-130962668 -  10q26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR378C  -     10q26.3   [Description]    (hg19-Feb_2009)
EnsemblMIR378C - 10q26.3 [CytoView hg19]  MIR378C - 10q26.3 [CytoView hg38]
Mapping of homologs : NCBIMIR378C [Mapview hg19]  MIR378C [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM611150
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR378C
Alternative Splicing GalleryENSG00000264803
Gene ExpressionMIR378C [ NCBI-GEO ]   MIR378C [ EBI - ARRAY_EXPRESS ]   MIR378C [ SEEK ]   MIR378C [ MEM ]
Gene Expression Viewer (FireBrowse)MIR378C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100422867
GTEX Portal (Tissue expression)MIR378C
Human Protein AtlasENSG00000264803-MIR378C [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR378C
DMDM Disease mutations100422867
Blocks (Seattle)MIR378C
Human Protein Atlas [tissue]ENSG00000264803-MIR378C [tissue]
Protein Interaction databases
FunCoupENSG00000264803
BioGRIDMIR378C
STRING (EMBL)MIR378C
ZODIACMIR378C
Ontologies - Pathways
Huge Navigator MIR378C [HugePedia]
snp3D : Map Gene to Disease100422867
BioCentury BCIQMIR378C
ClinGenMIR378C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100422867
Chemical/Pharm GKB GenePA165548834
Clinical trialMIR378C
Miscellaneous
canSAR (ICR)MIR378C (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR378C
EVEXMIR378C
GoPubMedMIR378C
iHOPMIR378C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:23:24 CET 2017

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