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MIR378E (microRNA 378e)

Identity

Alias_symbol (synonym)hsa-mir-378e
Other aliasmir-378e
HGNC (Hugo) MIR378E
LocusID (NCBI) 100616498
Atlas_Id 69310
Location 5q35.1  [Link to chromosome band 5q35]
Location_base_pair Starts at 170028488 and ends at 170028566 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR378E   41671
Cards
Entrez_Gene (NCBI)MIR378E  100616498  microRNA 378e
Aliasesmir-378e
GeneCards (Weizmann)MIR378E
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:170028488-170028566 [Contig_View]  MIR378E [Vega]
TCGA cBioPortalMIR378E
AceView (NCBI)MIR378E
Genatlas (Paris)MIR378E
WikiGenes100616498
SOURCE (Princeton)MIR378E
Genetics Home Reference (NIH)MIR378E
miRBaseMIR378E
dbDEMCMIR378E
Genomic and cartography
GoldenPath hg38 (UCSC)MIR378E  -     chr5:170028488-170028566 +  5q35.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR378E  -     5q35.1   [Description]    (hg19-Feb_2009)
EnsemblMIR378E - 5q35.1 [CytoView hg19]  MIR378E - 5q35.1 [CytoView hg38]
Mapping of homologs : NCBIMIR378E [Mapview hg19]  MIR378E [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM611276
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR378E
Gene ExpressionMIR378E [ NCBI-GEO ]   MIR378E [ EBI - ARRAY_EXPRESS ]   MIR378E [ SEEK ]   MIR378E [ MEM ]
Gene Expression Viewer (FireBrowse)MIR378E [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100616498
GTEX Portal (Tissue expression)MIR378E
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR378E
DMDM Disease mutations100616498
Blocks (Seattle)MIR378E
Protein Interaction databases
BioGRIDMIR378E
STRING (EMBL)MIR378E
ZODIACMIR378E
Ontologies - Pathways
Huge Navigator MIR378E [HugePedia]
snp3D : Map Gene to Disease100616498
BioCentury BCIQMIR378E
ClinGenMIR378E
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100616498
Clinical trialMIR378E
Miscellaneous
canSAR (ICR)MIR378E (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR378E
EVEXMIR378E
GoPubMedMIR378E
iHOPMIR378E
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:12:23 CET 2017

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