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MIR378F (microRNA 378f)

Identity

Alias_symbol (synonym)hsa-mir-378f
Other aliasmir-378f
HGNC (Hugo) MIR378F
LocusID (NCBI) 100616492
Atlas_Id 69311
Location 1p36.11  [Link to chromosome band 1p36]
Location_base_pair Starts at 23929070 and ends at 23929147 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR378F   41686
Cards
Entrez_Gene (NCBI)MIR378F  100616492  microRNA 378f
Aliasesmir-378f
GeneCards (Weizmann)MIR378F
Ensembl hg19 (Hinxton)ENSG00000264926 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000264926 [Gene_View]  chr1:23929070-23929147 [Contig_View]  MIR378F [Vega]
ICGC DataPortalENSG00000264926
TCGA cBioPortalMIR378F
AceView (NCBI)MIR378F
Genatlas (Paris)MIR378F
WikiGenes100616492
SOURCE (Princeton)MIR378F
Genetics Home Reference (NIH)MIR378F
miRBaseMIR378F
dbDEMCMIR378F
Genomic and cartography
GoldenPath hg38 (UCSC)MIR378F  -     chr1:23929070-23929147 +  1p36.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR378F  -     1p36.11   [Description]    (hg19-Feb_2009)
EnsemblMIR378F - 1p36.11 [CytoView hg19]  MIR378F - 1p36.11 [CytoView hg38]
Mapping of homologs : NCBIMIR378F [Mapview hg19]  MIR378F [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM611280
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR378F
Alternative Splicing GalleryENSG00000264926
Gene ExpressionMIR378F [ NCBI-GEO ]   MIR378F [ EBI - ARRAY_EXPRESS ]   MIR378F [ SEEK ]   MIR378F [ MEM ]
Gene Expression Viewer (FireBrowse)MIR378F [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100616492
GTEX Portal (Tissue expression)MIR378F
Human Protein AtlasENSG00000264926-MIR378F [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR378F
DMDM Disease mutations100616492
Blocks (Seattle)MIR378F
Human Protein Atlas [tissue]ENSG00000264926-MIR378F [tissue]
Protein Interaction databases
FunCoupENSG00000264926
BioGRIDMIR378F
STRING (EMBL)MIR378F
ZODIACMIR378F
Ontologies - Pathways
Huge Navigator MIR378F [HugePedia]
snp3D : Map Gene to Disease100616492
BioCentury BCIQMIR378F
ClinGenMIR378F
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100616492
Clinical trialMIR378F
Miscellaneous
canSAR (ICR)MIR378F (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR378F
EVEXMIR378F
GoPubMedMIR378F
iHOPMIR378F
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:01:32 CET 2017

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