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MIR378J (microRNA 378j)

Identity

Alias (NCBI)hsa-mir-378j
HGNC (Hugo) MIR378J
HGNC Alias symbhsa-mir-378j
LocusID (NCBI) 102465136
Atlas_Id 69312
Location 17q12  [Link to chromosome band 17q12]
Location_base_pair Starts at 37614931 and ends at 37615039 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)MIR378J   49979
Cards
Entrez_Gene (NCBI)MIR378J    microRNA 378j
Aliaseshsa-mir-378j
GeneCards (Weizmann)MIR378J
Ensembl hg19 (Hinxton)ENSG00000274620 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000274620 [Gene_View]  ENSG00000274620 [Sequence]  chr17:37614931-37615039 [Contig_View]  MIR378J [Vega]
ICGC DataPortalENSG00000274620
TCGA cBioPortalMIR378J
AceView (NCBI)MIR378J
Genatlas (Paris)MIR378J
SOURCE (Princeton)MIR378J
Genetics Home Reference (NIH)MIR378J
miRBaseMIR378J
dbDEMCMIR378J
Genomic and cartography
GoldenPath hg38 (UCSC)MIR378J  -     chr17:37614931-37615039 -  17q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR378J  -     17q12   [Description]    (hg19-Feb_2009)
GoldenPathMIR378J - 17q12 [CytoView hg19]  MIR378J - 17q12 [CytoView hg38]
ImmunoBaseENSG00000274620
genome Data Viewer NCBIMIR378J [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000017 NT_187614
Consensus coding sequences : CCDS (NCBI)MIR378J
Alternative Splicing GalleryENSG00000274620
Gene ExpressionMIR378J [ NCBI-GEO ]   MIR378J [ EBI - ARRAY_EXPRESS ]   MIR378J [ SEEK ]   MIR378J [ MEM ]
Gene Expression Viewer (FireBrowse)MIR378J [ Firebrowse - Broad ]
GenevisibleExpression of MIR378J in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102465136
GTEX Portal (Tissue expression)MIR378J
Human Protein AtlasENSG00000274620-MIR378J [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR378J
Blocks (Seattle)MIR378J
Human Protein Atlas [tissue]ENSG00000274620-MIR378J [tissue]
Protein Interaction databases
BioGRIDMIR378J
STRING (EMBL)MIR378J
ZODIACMIR378J
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR378J
EVEXMIR378J
GoPubMedMIR378J
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:14:16 CET 2020

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