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MIR3940 (microRNA 3940)

Identity

Alias_symbol (synonym)hsa-mir-3940
Other aliasmir-3940
HGNC (Hugo) MIR3940
LocusID (NCBI) 100500888
Atlas_Id 53428
Location 19p13.3  [Link to chromosome band 19p13]
Location_base_pair Starts at 6416410 and ends at 6416511 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR3940   38893
Cards
Entrez_Gene (NCBI)MIR3940  100500888  microRNA 3940
Aliasesmir-3940
GeneCards (Weizmann)MIR3940
Ensembl hg19 (Hinxton)ENSG00000266722 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000266722 [Gene_View]  chr19:6416410-6416511 [Contig_View]  MIR3940 [Vega]
ICGC DataPortalENSG00000266722
TCGA cBioPortalMIR3940
AceView (NCBI)MIR3940
Genatlas (Paris)MIR3940
WikiGenes100500888
SOURCE (Princeton)MIR3940
Genetics Home Reference (NIH)MIR3940
miRBaseMIR3940
dbDEMCMIR3940
Genomic and cartography
GoldenPath hg38 (UCSC)MIR3940  -     chr19:6416410-6416511 -  19p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR3940  -     19p13.3   [Description]    (hg19-Feb_2009)
EnsemblMIR3940 - 19p13.3 [CytoView hg19]  MIR3940 - 19p13.3 [CytoView hg38]
Mapping of homologs : NCBIMIR3940 [Mapview hg19]  MIR3940 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM611266
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR3940
Alternative Splicing GalleryENSG00000266722
Gene ExpressionMIR3940 [ NCBI-GEO ]   MIR3940 [ EBI - ARRAY_EXPRESS ]   MIR3940 [ SEEK ]   MIR3940 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR3940 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100500888
GTEX Portal (Tissue expression)MIR3940
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR3940
DMDM Disease mutations100500888
Blocks (Seattle)MIR3940
Human Protein AtlasENSG00000266722
Protein Interaction databases
FunCoupENSG00000266722
BioGRIDMIR3940
STRING (EMBL)MIR3940
ZODIACMIR3940
Ontologies - Pathways
Huge Navigator MIR3940 [HugePedia]
snp3D : Map Gene to Disease100500888
BioCentury BCIQMIR3940
ClinGenMIR3940
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100500888
Clinical trialMIR3940
Miscellaneous
canSAR (ICR)MIR3940 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR3940
EVEXMIR3940
GoPubMedMIR3940
iHOPMIR3940
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 1 17:07:24 CEST 2017

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