Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR3976HG (MIR3976 host gene)

Identity

Alias_namesMIR3976 host gene (non-protein coding)
Alias_symbol (synonym)LINC01469
Other alias
HGNC (Hugo) MIR3976HG
LocusID (NCBI) 645355
Atlas_Id 69353
Location 18p11.31  [Link to chromosome band 18p11]
Location_base_pair Starts at 5748818 and ends at 5795900 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR3976HG   51104
Cards
Entrez_Gene (NCBI)MIR3976HG  645355  MIR3976 host gene
AliasesLINC01469
GeneCards (Weizmann)MIR3976HG
Ensembl hg19 (Hinxton)ENSG00000261738 [Gene_View]  chr18:5748818-5795900 [Contig_View]  MIR3976HG [Vega]
Ensembl hg38 (Hinxton)ENSG00000261738 [Gene_View]  chr18:5748818-5795900 [Contig_View]  MIR3976HG [Vega]
ICGC DataPortalENSG00000261738
TCGA cBioPortalMIR3976HG
AceView (NCBI)MIR3976HG
Genatlas (Paris)MIR3976HG
WikiGenes645355
SOURCE (Princeton)MIR3976HG
Genetics Home Reference (NIH)MIR3976HG
miRBaseMIR3976HG
dbDEMCMIR3976HG
Genomic and cartography
GoldenPath hg19 (UCSC)MIR3976HG  -     chr18:5748818-5795900 +  18p11.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR3976HG  -     18p11.31   [Description]    (hg38-Dec_2013)
EnsemblMIR3976HG - 18p11.31 [CytoView hg19]  MIR3976HG - 18p11.31 [CytoView hg38]
Mapping of homologs : NCBIMIR3976HG [Mapview hg19]  MIR3976HG [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF301223 HG509697 HG509698 HG509699
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000018 NC_018929 NT_010859 NW_004929409
Consensus coding sequences : CCDS (NCBI)MIR3976HG
Cluster EST : UnigeneHs.632356 [ NCBI ]
CGAP (NCI)Hs.632356
Alternative Splicing GalleryENSG00000261738
Gene ExpressionMIR3976HG [ NCBI-GEO ]   MIR3976HG [ EBI - ARRAY_EXPRESS ]   MIR3976HG [ SEEK ]   MIR3976HG [ MEM ]
Gene Expression Viewer (FireBrowse)MIR3976HG [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)645355
GTEX Portal (Tissue expression)MIR3976HG
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR3976HG
DMDM Disease mutations645355
Blocks (Seattle)MIR3976HG
Human Protein AtlasENSG00000261738
Protein Interaction databases
FunCoupENSG00000261738
BioGRIDMIR3976HG
STRING (EMBL)MIR3976HG
ZODIACMIR3976HG
Ontologies - Pathways
Huge Navigator MIR3976HG [HugePedia]
snp3D : Map Gene to Disease645355
BioCentury BCIQMIR3976HG
ClinGenMIR3976HG
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD645355
Clinical trialMIR3976HG
Miscellaneous
canSAR (ICR)MIR3976HG (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR3976HG
EVEXMIR3976HG
GoPubMedMIR3976HG
iHOPMIR3976HG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:29:44 CET 2017

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