Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR3978 (microRNA 3978)


Alias (NCBI)-
HGNC (Hugo) MIR3978
HGNC Alias symbhsa-mir-3978
LocusID (NCBI) 100616491
Atlas_Id 57517
Location Xq23  [Link to chromosome band Xq23]
Location_base_pair Starts at 110082118 and ends at 110082218 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)MIR3978   41630
Entrez_Gene (NCBI)MIR3978    microRNA 3978
GeneCards (Weizmann)MIR3978
Ensembl hg19 (Hinxton)ENSG00000265584 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265584 [Gene_View]  ENSG00000265584 [Sequence]  chrX:110082118-110082218 [Contig_View]  MIR3978 [Vega]
ICGC DataPortalENSG00000265584
TCGA cBioPortalMIR3978
AceView (NCBI)MIR3978
Genatlas (Paris)MIR3978
SOURCE (Princeton)MIR3978
Genetics Home Reference (NIH)MIR3978
Genomic and cartography
GoldenPath hg38 (UCSC)MIR3978  -     chrX:110082118-110082218 +  Xq23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR3978  -     Xq23   [Description]    (hg19-Feb_2009)
GoldenPathMIR3978 - Xq23 [CytoView hg19]  MIR3978 - Xq23 [CytoView hg38]
genome Data Viewer NCBIMIR3978 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR3978
Alternative Splicing GalleryENSG00000265584
Gene ExpressionMIR3978 [ NCBI-GEO ]   MIR3978 [ EBI - ARRAY_EXPRESS ]   MIR3978 [ SEEK ]   MIR3978 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR3978 [ Firebrowse - Broad ]
GenevisibleExpression of MIR3978 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100616491
GTEX Portal (Tissue expression)MIR3978
Human Protein AtlasENSG00000265584-MIR3978 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR3978
Blocks (Seattle)MIR3978
Human Protein Atlas [tissue]ENSG00000265584-MIR3978 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jan 1 18:25:58 CET 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us