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MIR4280 (microRNA 4280)

Identity

Alias_symbol (synonym)hsa-mir-4280
Other alias-
HGNC (Hugo) MIR4280
LocusID (NCBI) 100422887
Atlas_Id 69386
Location 5q14.3  [Link to chromosome band 5q14]
Location_base_pair Starts at 87114879 and ends at 87114954 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR4280   38334
Cards
Entrez_Gene (NCBI)MIR4280  100422887  microRNA 4280
Aliases
GeneCards (Weizmann)MIR4280
Ensembl hg19 (Hinxton)ENSG00000265919 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265919 [Gene_View]  chr5:87114879-87114954 [Contig_View]  MIR4280 [Vega]
ICGC DataPortalENSG00000265919
TCGA cBioPortalMIR4280
AceView (NCBI)MIR4280
Genatlas (Paris)MIR4280
WikiGenes100422887
SOURCE (Princeton)MIR4280
Genetics Home Reference (NIH)MIR4280
miRBaseMIR4280
dbDEMCMIR4280
Genomic and cartography
GoldenPath hg38 (UCSC)MIR4280  -     chr5:87114879-87114954 -  5q14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR4280  -     5q14.3   [Description]    (hg19-Feb_2009)
EnsemblMIR4280 - 5q14.3 [CytoView hg19]  MIR4280 - 5q14.3 [CytoView hg38]
Mapping of homologs : NCBIMIR4280 [Mapview hg19]  MIR4280 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR4280
Alternative Splicing GalleryENSG00000265919
Gene ExpressionMIR4280 [ NCBI-GEO ]   MIR4280 [ EBI - ARRAY_EXPRESS ]   MIR4280 [ SEEK ]   MIR4280 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR4280 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100422887
GTEX Portal (Tissue expression)MIR4280
Human Protein AtlasENSG00000265919-MIR4280 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR4280
DMDM Disease mutations100422887
Blocks (Seattle)MIR4280
Human Protein Atlas [tissue]ENSG00000265919-MIR4280 [tissue]
Protein Interaction databases
FunCoupENSG00000265919
BioGRIDMIR4280
STRING (EMBL)MIR4280
ZODIACMIR4280
Ontologies - Pathways
Huge Navigator MIR4280 [HugePedia]
snp3D : Map Gene to Disease100422887
BioCentury BCIQMIR4280
ClinGenMIR4280
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100422887
Chemical/Pharm GKB GenePA165660384
Clinical trialMIR4280
Miscellaneous
canSAR (ICR)MIR4280 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR4280
EVEXMIR4280
GoPubMedMIR4280
iHOPMIR4280
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:58:07 CET 2017

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