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MIR4316 (microRNA 4316)

Identity

Alias_symbol (synonym)hsa-mir-4316
Other alias-
HGNC (Hugo) MIR4316
LocusID (NCBI) 100422851
Atlas_Id 69423
Location 17q25.3  [Link to chromosome band 17q25]
Location_base_pair Starts at 77396984 and ends at 77397054 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR4316   38306
Cards
Entrez_Gene (NCBI)MIR4316  100422851  microRNA 4316
Aliases
GeneCards (Weizmann)MIR4316
Ensembl hg19 (Hinxton)ENSG00000264060 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000264060 [Gene_View]  chr17:77396984-77397054 [Contig_View]  MIR4316 [Vega]
ICGC DataPortalENSG00000264060
TCGA cBioPortalMIR4316
AceView (NCBI)MIR4316
Genatlas (Paris)MIR4316
WikiGenes100422851
SOURCE (Princeton)MIR4316
Genetics Home Reference (NIH)MIR4316
miRBaseMIR4316
dbDEMCMIR4316
Genomic and cartography
GoldenPath hg38 (UCSC)MIR4316  -     chr17:77396984-77397054 -  17q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR4316  -     17q25.3   [Description]    (hg19-Feb_2009)
EnsemblMIR4316 - 17q25.3 [CytoView hg19]  MIR4316 - 17q25.3 [CytoView hg38]
Mapping of homologs : NCBIMIR4316 [Mapview hg19]  MIR4316 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR4316
Alternative Splicing GalleryENSG00000264060
Gene ExpressionMIR4316 [ NCBI-GEO ]   MIR4316 [ EBI - ARRAY_EXPRESS ]   MIR4316 [ SEEK ]   MIR4316 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR4316 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100422851
GTEX Portal (Tissue expression)MIR4316
Human Protein AtlasENSG00000264060-MIR4316 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR4316
DMDM Disease mutations100422851
Blocks (Seattle)MIR4316
Human Protein Atlas [tissue]ENSG00000264060-MIR4316 [tissue]
Protein Interaction databases
FunCoupENSG00000264060
BioGRIDMIR4316
STRING (EMBL)MIR4316
ZODIACMIR4316
Ontologies - Pathways
Huge Navigator MIR4316 [HugePedia]
snp3D : Map Gene to Disease100422851
BioCentury BCIQMIR4316
ClinGenMIR4316
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100422851
Chemical/Pharm GKB GenePA165432207
Clinical trialMIR4316
Miscellaneous
canSAR (ICR)MIR4316 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR4316
EVEXMIR4316
GoPubMedMIR4316
iHOPMIR4316
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:14:20 CET 2017

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