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MIR4449 (microRNA 4449)

Identity

Alias_symbol (synonym)hsa-mir-4449
Other alias-
HGNC (Hugo) MIR4449
LocusID (NCBI) 100616436
Atlas_Id 69463
Location 4q12  [Link to chromosome band 4q12]
Location_base_pair Starts at 52712682 and ends at 52712747 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR4449   41864
Cards
Entrez_Gene (NCBI)MIR4449  100616436  microRNA 4449
Aliases
GeneCards (Weizmann)MIR4449
Ensembl hg19 (Hinxton)ENSG00000264585 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000264585 [Gene_View]  chr4:52712682-52712747 [Contig_View]  MIR4449 [Vega]
ICGC DataPortalENSG00000264585
TCGA cBioPortalMIR4449
AceView (NCBI)MIR4449
Genatlas (Paris)MIR4449
WikiGenes100616436
SOURCE (Princeton)MIR4449
Genetics Home Reference (NIH)MIR4449
miRBaseMIR4449
dbDEMCMIR4449
Genomic and cartography
GoldenPath hg38 (UCSC)MIR4449  -     chr4:52712682-52712747 +  4q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR4449  -     4q12   [Description]    (hg19-Feb_2009)
EnsemblMIR4449 - 4q12 [CytoView hg19]  MIR4449 - 4q12 [CytoView hg38]
Mapping of homologs : NCBIMIR4449 [Mapview hg19]  MIR4449 [Mapview hg38]
OMIM614627   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR4449
Alternative Splicing GalleryENSG00000264585
Gene ExpressionMIR4449 [ NCBI-GEO ]   MIR4449 [ EBI - ARRAY_EXPRESS ]   MIR4449 [ SEEK ]   MIR4449 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR4449 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100616436
GTEX Portal (Tissue expression)MIR4449
Human Protein AtlasENSG00000264585-MIR4449 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR4449
DMDM Disease mutations100616436
Blocks (Seattle)MIR4449
Human Protein Atlas [tissue]ENSG00000264585-MIR4449 [tissue]
Protein Interaction databases
FunCoupENSG00000264585
BioGRIDMIR4449
STRING (EMBL)MIR4449
ZODIACMIR4449
Ontologies - Pathways
Huge Navigator MIR4449 [HugePedia]
snp3D : Map Gene to Disease100616436
BioCentury BCIQMIR4449
ClinGenMIR4449
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100616436
Clinical trialMIR4449
Miscellaneous
canSAR (ICR)MIR4449 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR4449
EVEXMIR4449
GoPubMedMIR4449
iHOPMIR4449
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:10:31 CET 2017

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