Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR4509-1 (microRNA 4509-1)

Identity

Alias_symbol (synonym)hsa-mir-4509-1
Other alias-
HGNC (Hugo) MIR4509-1
LocusID (NCBI) 100616223
Atlas_Id 69512
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 23197827 and ends at 23197920 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR4509-1   41860
Cards
Entrez_Gene (NCBI)MIR4509-1  100616223  microRNA 4509-1
Aliases
GeneCards (Weizmann)MIR4509-1
Ensembl hg19 (Hinxton)ENSG00000276941 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000276941 [Gene_View]  chr15:23197827-23197920 [Contig_View]  MIR4509-1 [Vega]
ICGC DataPortalENSG00000276941
TCGA cBioPortalMIR4509-1
AceView (NCBI)MIR4509-1
Genatlas (Paris)MIR4509-1
WikiGenes100616223
SOURCE (Princeton)MIR4509-1
Genetics Home Reference (NIH)MIR4509-1
miRBaseMIR4509-1
dbDEMCMIR4509-1
Genomic and cartography
GoldenPath hg38 (UCSC)MIR4509-1  -     chr15:23197827-23197920 +  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR4509-1  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblMIR4509-1 - 15q11.2 [CytoView hg19]  MIR4509-1 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBIMIR4509-1 [Mapview hg19]  MIR4509-1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000015 NC_018926 NT_187603 NT_187659
Consensus coding sequences : CCDS (NCBI)MIR4509-1
Alternative Splicing GalleryENSG00000276941
Gene ExpressionMIR4509-1 [ NCBI-GEO ]   MIR4509-1 [ EBI - ARRAY_EXPRESS ]   MIR4509-1 [ SEEK ]   MIR4509-1 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR4509-1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100616223
GTEX Portal (Tissue expression)MIR4509-1
Human Protein AtlasENSG00000276941-MIR4509-1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR4509-1
DMDM Disease mutations100616223
Blocks (Seattle)MIR4509-1
Human Protein Atlas [tissue]ENSG00000276941-MIR4509-1 [tissue]
Protein Interaction databases
FunCoupENSG00000276941
BioGRIDMIR4509-1
STRING (EMBL)MIR4509-1
ZODIACMIR4509-1
Ontologies - Pathways
Huge Navigator MIR4509-1 [HugePedia]
snp3D : Map Gene to Disease100616223
BioCentury BCIQMIR4509-1
ClinGenMIR4509-1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100616223
Clinical trialMIR4509-1
Miscellaneous
canSAR (ICR)MIR4509-1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR4509-1
EVEXMIR4509-1
GoPubMedMIR4509-1
iHOPMIR4509-1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:31:45 CET 2017

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