Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR450A1 (microRNA 450a-1)

Identity

Alias_namesMIRN450
MIRN450-1
MIRN450A1
microRNA 450
microRNA 450-1
Alias_symbol (synonym)hsa-mir-450
hsa-mir-450-1
hsa-mir-450a-1
Other aliasMIRN450A-1
mir-450a-1
HGNC (Hugo) MIR450A1
LocusID (NCBI) 554214
Atlas_Id 69515
Location Xq26.3  [Link to chromosome band Xq26]
Location_base_pair Starts at 134540341 and ends at 134540431 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR450A1   28008
Cards
Entrez_Gene (NCBI)MIR450A1  554214  microRNA 450a-1
AliasesMIRN450; MIRN450-1; MIRN450A-1; MIRN450A1; 
hsa-mir-450; mir-450a-1
GeneCards (Weizmann)MIR450A1
Ensembl hg19 (Hinxton)ENSG00000199132 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000199132 [Gene_View]  chrX:134540341-134540431 [Contig_View]  MIR450A1 [Vega]
ICGC DataPortalENSG00000199132
TCGA cBioPortalMIR450A1
AceView (NCBI)MIR450A1
Genatlas (Paris)MIR450A1
WikiGenes554214
SOURCE (Princeton)MIR450A1
Genetics Home Reference (NIH)MIR450A1
miRBaseMIR450A1
dbDEMCMIR450A1
Genomic and cartography
GoldenPath hg38 (UCSC)MIR450A1  -     chrX:134540341-134540431 -  Xq26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR450A1  -     Xq26.3   [Description]    (hg19-Feb_2009)
EnsemblMIR450A1 - Xq26.3 [CytoView hg19]  MIR450A1 - Xq26.3 [CytoView hg38]
Mapping of homologs : NCBIMIR450A1 [Mapview hg19]  MIR450A1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM609024
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR450A1
Alternative Splicing GalleryENSG00000199132
Gene ExpressionMIR450A1 [ NCBI-GEO ]   MIR450A1 [ EBI - ARRAY_EXPRESS ]   MIR450A1 [ SEEK ]   MIR450A1 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR450A1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)554214
GTEX Portal (Tissue expression)MIR450A1
Human Protein AtlasENSG00000199132-MIR450A1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR450A1
DMDM Disease mutations554214
Blocks (Seattle)MIR450A1
Human Protein Atlas [tissue]ENSG00000199132-MIR450A1 [tissue]
Protein Interaction databases
FunCoupENSG00000199132
BioGRIDMIR450A1
STRING (EMBL)MIR450A1
ZODIACMIR450A1
Ontologies - Pathways
Huge Navigator MIR450A1 [HugePedia]
snp3D : Map Gene to Disease554214
BioCentury BCIQMIR450A1
ClinGenMIR450A1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD554214
Chemical/Pharm GKB GenePA164722720
Clinical trialMIR450A1
Miscellaneous
canSAR (ICR)MIR450A1 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR450A1
EVEXMIR450A1
GoPubMedMIR450A1
iHOPMIR450A1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:00:04 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.