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MIR4538 (microRNA 4538)

Identity

Alias_symbol (synonym)hsa-mir-4538
Other alias-
HGNC (Hugo) MIR4538
LocusID (NCBI) 100616276
Atlas_Id 76679
Location 14q32.33  [Link to chromosome band 14q32]
Location_base_pair Starts at 105858165 and ends at 105858242 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR4538   41664
Cards
Entrez_Gene (NCBI)MIR4538  100616276  microRNA 4538
Aliases
GeneCards (Weizmann)MIR4538
Ensembl hg19 (Hinxton)ENSG00000263413 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000263413 [Gene_View]  chr14:105858165-105858242 [Contig_View]  MIR4538 [Vega]
ICGC DataPortalENSG00000263413
TCGA cBioPortalMIR4538
AceView (NCBI)MIR4538
Genatlas (Paris)MIR4538
WikiGenes100616276
SOURCE (Princeton)MIR4538
Genetics Home Reference (NIH)MIR4538
miRBaseMIR4538
dbDEMCMIR4538
Genomic and cartography
GoldenPath hg38 (UCSC)MIR4538  -     chr14:105858165-105858242 -  14q32.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR4538  -     14q32.33   [Description]    (hg19-Feb_2009)
EnsemblMIR4538 - 14q32.33 [CytoView hg19]  MIR4538 - 14q32.33 [CytoView hg38]
Mapping of homologs : NCBIMIR4538 [Mapview hg19]  MIR4538 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000014 NC_018925 NT_187600
Consensus coding sequences : CCDS (NCBI)MIR4538
Alternative Splicing GalleryENSG00000263413
Gene ExpressionMIR4538 [ NCBI-GEO ]   MIR4538 [ EBI - ARRAY_EXPRESS ]   MIR4538 [ SEEK ]   MIR4538 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR4538 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100616276
GTEX Portal (Tissue expression)MIR4538
Human Protein AtlasENSG00000263413-MIR4538 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR4538
DMDM Disease mutations100616276
Blocks (Seattle)MIR4538
Human Protein Atlas [tissue]ENSG00000263413-MIR4538 [tissue]
Protein Interaction databases
FunCoupENSG00000263413
BioGRIDMIR4538
STRING (EMBL)MIR4538
ZODIACMIR4538
Ontologies - Pathways
Huge Navigator MIR4538 [HugePedia]
snp3D : Map Gene to Disease100616276
BioCentury BCIQMIR4538
ClinGenMIR4538
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100616276
Clinical trialMIR4538
Miscellaneous
canSAR (ICR)MIR4538 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR4538
EVEXMIR4538
GoPubMedMIR4538
iHOPMIR4538
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:14:50 CET 2017

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