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MIR4642 (microRNA 4642)

Identity

Alias (NCBI)-
HGNC (Hugo) MIR4642
HGNC Alias symbhsa-mir-4642
LocusID (NCBI) 100616352
Atlas_Id 69555
Location 6p21.1  [Link to chromosome band 6p21]
Location_base_pair Starts at 44435641 and ends at 44435722 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR4642   41865
Cards
Entrez_Gene (NCBI)MIR4642  100616352  microRNA 4642
Aliases
GeneCards (Weizmann)MIR4642
Ensembl hg19 (Hinxton)ENSG00000266619 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000266619 [Gene_View]  ENSG00000266619 [Sequence]  chr6:44435641-44435722 [Contig_View]  MIR4642 [Vega]
ICGC DataPortalENSG00000266619
TCGA cBioPortalMIR4642
AceView (NCBI)MIR4642
Genatlas (Paris)MIR4642
WikiGenes100616352
SOURCE (Princeton)MIR4642
Genetics Home Reference (NIH)MIR4642
miRBaseMIR4642
dbDEMCMIR4642
Genomic and cartography
GoldenPath hg38 (UCSC)MIR4642  -     chr6:44435641-44435722 +  6p21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR4642  -     6p21.1   [Description]    (hg19-Feb_2009)
GoldenPathMIR4642 - 6p21.1 [CytoView hg19]  MIR4642 - 6p21.1 [CytoView hg38]
ImmunoBaseENSG00000266619
genome Data Viewer NCBIMIR4642 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR4642
Alternative Splicing GalleryENSG00000266619
Gene ExpressionMIR4642 [ NCBI-GEO ]   MIR4642 [ EBI - ARRAY_EXPRESS ]   MIR4642 [ SEEK ]   MIR4642 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR4642 [ Firebrowse - Broad ]
GenevisibleExpression of MIR4642 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100616352
GTEX Portal (Tissue expression)MIR4642
Human Protein AtlasENSG00000266619-MIR4642 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR4642
DMDM Disease mutations100616352
Blocks (Seattle)MIR4642
Human Protein Atlas [tissue]ENSG00000266619-MIR4642 [tissue]
Protein Interaction databases
FunCoupENSG00000266619
BioGRIDMIR4642
STRING (EMBL)MIR4642
ZODIACMIR4642
Ontologies - Pathways
Huge Navigator MIR4642 [HugePedia]
snp3D : Map Gene to Disease100616352
BioCentury BCIQMIR4642
ClinGenMIR4642
Clinical trials, drugs, therapy
Protein Interactions : CTD100616352
Clinical trialMIR4642
Miscellaneous
canSAR (ICR)MIR4642 (select the gene name)
HarmonizomeMIR4642
DataMed IndexMIR4642
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR4642
EVEXMIR4642
GoPubMedMIR4642
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Aug 22 19:26:05 CEST 2020

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