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MIR4643 (microRNA 4643)

Identity

Alias_symbol (synonym)hsa-mir-4643
Other alias-
HGNC (Hugo) MIR4643
LocusID (NCBI) 100616174
Atlas_Id 69556
Location 6q15  [Link to chromosome band 6q15]
Location_base_pair Starts at 91521660 and ends at 91521737 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR4643   41814
Cards
Entrez_Gene (NCBI)MIR4643  100616174  microRNA 4643
Aliases
GeneCards (Weizmann)MIR4643
Ensembl hg19 (Hinxton)ENSG00000263734 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000263734 [Gene_View]  ENSG00000263734 [Sequence]  chr6:91521660-91521737 [Contig_View]  MIR4643 [Vega]
ICGC DataPortalENSG00000263734
TCGA cBioPortalMIR4643
AceView (NCBI)MIR4643
Genatlas (Paris)MIR4643
WikiGenes100616174
SOURCE (Princeton)MIR4643
Genetics Home Reference (NIH)MIR4643
miRBaseMIR4643
dbDEMCMIR4643
Genomic and cartography
GoldenPath hg38 (UCSC)MIR4643  -     chr6:91521660-91521737 +  6q15   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR4643  -     6q15   [Description]    (hg19-Feb_2009)
EnsemblMIR4643 - 6q15 [CytoView hg19]  MIR4643 - 6q15 [CytoView hg38]
Mapping of homologs : NCBIMIR4643 [Mapview hg19]  MIR4643 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR4643
Alternative Splicing GalleryENSG00000263734
Gene ExpressionMIR4643 [ NCBI-GEO ]   MIR4643 [ EBI - ARRAY_EXPRESS ]   MIR4643 [ SEEK ]   MIR4643 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR4643 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100616174
GTEX Portal (Tissue expression)MIR4643
Human Protein AtlasENSG00000263734-MIR4643 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR4643
DMDM Disease mutations100616174
Blocks (Seattle)MIR4643
Human Protein Atlas [tissue]ENSG00000263734-MIR4643 [tissue]
Protein Interaction databases
FunCoupENSG00000263734
BioGRIDMIR4643
STRING (EMBL)MIR4643
ZODIACMIR4643
Ontologies - Pathways
Huge Navigator MIR4643 [HugePedia]
snp3D : Map Gene to Disease100616174
BioCentury BCIQMIR4643
ClinGenMIR4643
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100616174
Clinical trialMIR4643
Miscellaneous
canSAR (ICR)MIR4643 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR4643
EVEXMIR4643
GoPubMedMIR4643
iHOPMIR4643
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:15:08 CEST 2018

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