Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR4646 (microRNA 4646)

Identity

Alias_symbol (synonym)hsa-mir-4646
Other aliasmir-4646
HGNC (Hugo) MIR4646
LocusID (NCBI) 100616230
Atlas_Id 69559
Location 6p21.33  [Link to chromosome band 6p21]
Location_base_pair Starts at 31701029 and ends at 31701091 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR4646   41543
Cards
Entrez_Gene (NCBI)MIR4646  100616230  microRNA 4646
Aliasesmir-4646
GeneCards (Weizmann)MIR4646
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:31701029-31701091 [Contig_View]  MIR4646 [Vega]
TCGA cBioPortalMIR4646
AceView (NCBI)MIR4646
Genatlas (Paris)MIR4646
WikiGenes100616230
SOURCE (Princeton)MIR4646
Genetics Home Reference (NIH)MIR4646
miRBaseMIR4646
dbDEMCMIR4646
Genomic and cartography
GoldenPath hg38 (UCSC)MIR4646  -     chr6:31701029-31701091 -  6p21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR4646  -     6p21.33   [Description]    (hg19-Feb_2009)
EnsemblMIR4646 - 6p21.33 [CytoView hg19]  MIR4646 - 6p21.33 [CytoView hg38]
Mapping of homologs : NCBIMIR4646 [Mapview hg19]  MIR4646 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM611368
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000006 NC_018917 NT_113891 NT_167245 NT_167246 NT_167247 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)MIR4646
Gene ExpressionMIR4646 [ NCBI-GEO ]   MIR4646 [ EBI - ARRAY_EXPRESS ]   MIR4646 [ SEEK ]   MIR4646 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR4646 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100616230
GTEX Portal (Tissue expression)MIR4646
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR4646
DMDM Disease mutations100616230
Blocks (Seattle)MIR4646
Protein Interaction databases
BioGRIDMIR4646
STRING (EMBL)MIR4646
ZODIACMIR4646
Ontologies - Pathways
Huge Navigator MIR4646 [HugePedia]
snp3D : Map Gene to Disease100616230
BioCentury BCIQMIR4646
ClinGenMIR4646
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100616230
Clinical trialMIR4646
Miscellaneous
canSAR (ICR)MIR4646 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR4646
EVEXMIR4646
GoPubMedMIR4646
iHOPMIR4646
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:15:08 CEST 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.