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MIR4680 (microRNA 4680)

Identity

Alias_symbol (synonym)hsa-mir-4680
Other alias-
HGNC (Hugo) MIR4680
LocusID (NCBI) 100616113
Atlas_Id 69595
Location 10q25.2  [Link to chromosome band 10q25]
Location_base_pair Starts at 110898090 and ends at 110898155 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR4680   41541
Cards
Entrez_Gene (NCBI)MIR4680  100616113  microRNA 4680
Aliases
GeneCards (Weizmann)MIR4680
Ensembl hg19 (Hinxton)ENSG00000265827 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265827 [Gene_View]  chr10:110898090-110898155 [Contig_View]  MIR4680 [Vega]
ICGC DataPortalENSG00000265827
TCGA cBioPortalMIR4680
AceView (NCBI)MIR4680
Genatlas (Paris)MIR4680
WikiGenes100616113
SOURCE (Princeton)MIR4680
Genetics Home Reference (NIH)MIR4680
miRBaseMIR4680
dbDEMCMIR4680
Genomic and cartography
GoldenPath hg38 (UCSC)MIR4680  -     chr10:110898090-110898155 +  10q25.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR4680  -     10q25.2   [Description]    (hg19-Feb_2009)
EnsemblMIR4680 - 10q25.2 [CytoView hg19]  MIR4680 - 10q25.2 [CytoView hg38]
Mapping of homologs : NCBIMIR4680 [Mapview hg19]  MIR4680 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR4680
Alternative Splicing GalleryENSG00000265827
Gene ExpressionMIR4680 [ NCBI-GEO ]   MIR4680 [ EBI - ARRAY_EXPRESS ]   MIR4680 [ SEEK ]   MIR4680 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR4680 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100616113
GTEX Portal (Tissue expression)MIR4680
Human Protein AtlasENSG00000265827-MIR4680 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR4680
DMDM Disease mutations100616113
Blocks (Seattle)MIR4680
Human Protein Atlas [tissue]ENSG00000265827-MIR4680 [tissue]
Protein Interaction databases
FunCoupENSG00000265827
BioGRIDMIR4680
STRING (EMBL)MIR4680
ZODIACMIR4680
Ontologies - Pathways
Huge Navigator MIR4680 [HugePedia]
snp3D : Map Gene to Disease100616113
BioCentury BCIQMIR4680
ClinGenMIR4680
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100616113
Clinical trialMIR4680
Miscellaneous
canSAR (ICR)MIR4680 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR4680
EVEXMIR4680
GoPubMedMIR4680
iHOPMIR4680
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:15:01 CET 2017

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