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MIR4697HG (MIR4697 host gene)

Identity

Other aliasLINC00947
HGNC (Hugo) MIR4697HG
LocusID (NCBI) 283174
Atlas_Id 56749
Location 11q25  [Link to chromosome band 11q25]
Location_base_pair Starts at 133897712 and ends at 133900744 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR4697HG   27448
Cards
Entrez_Gene (NCBI)MIR4697HG  283174  MIR4697 host gene
AliasesLINC00947
GeneCards (Weizmann)MIR4697HG
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr11:133897712-133900744 [Contig_View]  MIR4697HG [Vega]
TCGA cBioPortalMIR4697HG
AceView (NCBI)MIR4697HG
Genatlas (Paris)MIR4697HG
WikiGenes283174
SOURCE (Princeton)MIR4697HG
Genetics Home Reference (NIH)MIR4697HG
miRBaseMIR4697HG
dbDEMCMIR4697HG
Genomic and cartography
GoldenPath hg38 (UCSC)MIR4697HG  -     chr11:133897712-133900744 -  11q25   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR4697HG  -     11q25   [Description]    (hg19-Feb_2009)
EnsemblMIR4697HG - 11q25 [CytoView hg19]  MIR4697HG - 11q25 [CytoView hg38]
Mapping of homologs : NCBIMIR4697HG [Mapview hg19]  MIR4697HG [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK123849 AL133591 BC001512 BC101691 BC104851
RefSeq transcript (Entrez)NM_001001873
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR4697HG
Cluster EST : UnigeneHs.504370 [ NCBI ]
CGAP (NCI)Hs.504370
Gene ExpressionMIR4697HG [ NCBI-GEO ]   MIR4697HG [ EBI - ARRAY_EXPRESS ]   MIR4697HG [ SEEK ]   MIR4697HG [ MEM ]
Gene Expression Viewer (FireBrowse)MIR4697HG [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)283174
GTEX Portal (Tissue expression)MIR4697HG
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6AWC8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6AWC8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6AWC8
Splice isoforms : SwissVarQ6AWC8
PhosPhoSitePlusQ6AWC8
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR4697HG
DMDM Disease mutations283174
Blocks (Seattle)MIR4697HG
SuperfamilyQ6AWC8
Peptide AtlasQ6AWC8
IPIIPI00465118   
Protein Interaction databases
DIP (DOE-UCLA)Q6AWC8
IntAct (EBI)Q6AWC8
BioGRIDMIR4697HG
STRING (EMBL)MIR4697HG
ZODIACMIR4697HG
Ontologies - Pathways
QuickGOQ6AWC8
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkMIR4697HG
Atlas of Cancer Signalling NetworkMIR4697HG
Wikipedia pathwaysMIR4697HG
Orthology - Evolution
OrthoDB283174
Phylogenetic Trees/Animal Genes : TreeFamMIR4697HG
HOVERGENQ6AWC8
HOGENOMQ6AWC8
Homologs : HomoloGeneMIR4697HG
Homology/Alignments : Family Browser (UCSC)MIR4697HG
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMIR4697HG [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MIR4697HG
dbVarMIR4697HG
ClinVarMIR4697HG
1000_GenomesMIR4697HG 
Exome Variant ServerMIR4697HG
ExAC (Exome Aggregation Consortium)MIR4697HG (select the gene name)
Genetic variants : HAPMAP283174
Genomic Variants (DGV)MIR4697HG [DGVbeta]
DECIPHERMIR4697HG [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMIR4697HG 
Mutations
ICGC Data PortalMIR4697HG 
TCGA Data PortalMIR4697HG 
Broad Tumor PortalMIR4697HG
OASIS PortalMIR4697HG [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMIR4697HG
BioMutasearch MIR4697HG
DgiDB (Drug Gene Interaction Database)MIR4697HG
DoCM (Curated mutations)MIR4697HG (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MIR4697HG (select a term)
intoGenMIR4697HG
Cancer3DMIR4697HG(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMIR4697HG
Genetic Testing Registry MIR4697HG
NextProtQ6AWC8 [Medical]
TSGene283174
GENETestsMIR4697HG
Target ValidationMIR4697HG
Huge Navigator MIR4697HG [HugePedia]
snp3D : Map Gene to Disease283174
BioCentury BCIQMIR4697HG
ClinGenMIR4697HG
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283174
Clinical trialMIR4697HG
Miscellaneous
canSAR (ICR)MIR4697HG (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR4697HG
EVEXMIR4697HG
GoPubMedMIR4697HG
iHOPMIR4697HG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:44:11 CEST 2017

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