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MIR4788 (microRNA 4788)

Identity

Alias_symbol (synonym)hsa-mir-4788
Other alias-
HGNC (Hugo) MIR4788
LocusID (NCBI) 100616281
Atlas_Id 69702
Location 3q22.2  [Link to chromosome band 3q22]
Location_base_pair Starts at 134437827 and ends at 134437906 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR4788   41676
Cards
Entrez_Gene (NCBI)MIR4788  100616281  microRNA 4788
Aliases
GeneCards (Weizmann)MIR4788
Ensembl hg19 (Hinxton)ENSG00000263554 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000263554 [Gene_View]  chr3:134437827-134437906 [Contig_View]  MIR4788 [Vega]
ICGC DataPortalENSG00000263554
TCGA cBioPortalMIR4788
AceView (NCBI)MIR4788
Genatlas (Paris)MIR4788
WikiGenes100616281
SOURCE (Princeton)MIR4788
Genetics Home Reference (NIH)MIR4788
miRBaseMIR4788
dbDEMCMIR4788
Genomic and cartography
GoldenPath hg38 (UCSC)MIR4788  -     chr3:134437827-134437906 +  3q22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR4788  -     3q22.2   [Description]    (hg19-Feb_2009)
EnsemblMIR4788 - 3q22.2 [CytoView hg19]  MIR4788 - 3q22.2 [CytoView hg38]
Mapping of homologs : NCBIMIR4788 [Mapview hg19]  MIR4788 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR4788
Alternative Splicing GalleryENSG00000263554
Gene ExpressionMIR4788 [ NCBI-GEO ]   MIR4788 [ EBI - ARRAY_EXPRESS ]   MIR4788 [ SEEK ]   MIR4788 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR4788 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100616281
GTEX Portal (Tissue expression)MIR4788
Human Protein AtlasENSG00000263554-MIR4788 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR4788
DMDM Disease mutations100616281
Blocks (Seattle)MIR4788
Human Protein Atlas [tissue]ENSG00000263554-MIR4788 [tissue]
Protein Interaction databases
FunCoupENSG00000263554
BioGRIDMIR4788
STRING (EMBL)MIR4788
ZODIACMIR4788
Ontologies - Pathways
Huge Navigator MIR4788 [HugePedia]
snp3D : Map Gene to Disease100616281
BioCentury BCIQMIR4788
ClinGenMIR4788
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100616281
Clinical trialMIR4788
Miscellaneous
canSAR (ICR)MIR4788 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR4788
EVEXMIR4788
GoPubMedMIR4788
iHOPMIR4788
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:15:22 CET 2017

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