Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR490 (microRNA 490)

Identity

Alias_namesMIRN490
Alias_symbol (synonym)hsa-mir-490
miR-490
Other alias
HGNC (Hugo) MIR490
LocusID (NCBI) 574443
Atlas_Id 53281
Location 7q33  [Link to chromosome band 7q33]
Location_base_pair Starts at 136903167 and ends at 136903294 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR490   32075
Cards
Entrez_Gene (NCBI)MIR490  574443  microRNA 490
AliasesMIRN490; hsa-mir-490; miR-490
GeneCards (Weizmann)MIR490
Ensembl hg19 (Hinxton)ENSG00000207597 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207597 [Gene_View]  chr7:136903167-136903294 [Contig_View]  MIR490 [Vega]
ICGC DataPortalENSG00000207597
TCGA cBioPortalMIR490
AceView (NCBI)MIR490
Genatlas (Paris)MIR490
WikiGenes574443
SOURCE (Princeton)MIR490
Genetics Home Reference (NIH)MIR490
miRBaseMIR490
dbDEMCMIR490
Genomic and cartography
GoldenPath hg38 (UCSC)MIR490  -     chr7:136903167-136903294 +  7q33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR490  -     7q33   [Description]    (hg19-Feb_2009)
EnsemblMIR490 - 7q33 [CytoView hg19]  MIR490 - 7q33 [CytoView hg38]
Mapping of homologs : NCBIMIR490 [Mapview hg19]  MIR490 [Mapview hg38]
OMIM616972   
Gene and transcription
Genbank (Entrez)AY882316 LM609457
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR490
Alternative Splicing GalleryENSG00000207597
Gene ExpressionMIR490 [ NCBI-GEO ]   MIR490 [ EBI - ARRAY_EXPRESS ]   MIR490 [ SEEK ]   MIR490 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR490 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)574443
GTEX Portal (Tissue expression)MIR490
Human Protein AtlasENSG00000207597-MIR490 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR490
DMDM Disease mutations574443
Blocks (Seattle)MIR490
Human Protein Atlas [tissue]ENSG00000207597-MIR490 [tissue]
Protein Interaction databases
FunCoupENSG00000207597
BioGRIDMIR490
STRING (EMBL)MIR490
ZODIACMIR490
Ontologies - Pathways
Huge Navigator MIR490 [HugePedia]
snp3D : Map Gene to Disease574443
BioCentury BCIQMIR490
ClinGenMIR490
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD574443
Chemical/Pharm GKB GenePA164722736
Clinical trialMIR490
Miscellaneous
canSAR (ICR)MIR490 (select the gene name)
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR490
EVEXMIR490
GoPubMedMIR490
iHOPMIR490
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:59:59 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.