Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR496 (microRNA 496)

Identity

Alias_namesMIRN496
Alias_symbol (synonym)hsa-mir-496
Other aliasmir-496
HGNC (Hugo) MIR496
LocusID (NCBI) 574454
Atlas_Id 54837
Location 14q32.31  [Link to chromosome band 14q32]
Location_base_pair Starts at 101060573 and ends at 101060674 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR496   32086
Cards
Entrez_Gene (NCBI)MIR496  574454  microRNA 496
AliasesMIRN496; hsa-mir-496; mir-496
GeneCards (Weizmann)MIR496
Ensembl hg19 (Hinxton)ENSG00000207961 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207961 [Gene_View]  ENSG00000207961 [Sequence]  chr14:101060573-101060674 [Contig_View]  MIR496 [Vega]
ICGC DataPortalENSG00000207961
TCGA cBioPortalMIR496
AceView (NCBI)MIR496
Genatlas (Paris)MIR496
WikiGenes574454
SOURCE (Princeton)MIR496
Genetics Home Reference (NIH)MIR496
miRBaseMIR496
dbDEMCMIR496
Genomic and cartography
GoldenPath hg38 (UCSC)MIR496  -     chr14:101060573-101060674 +  14q32.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR496  -     14q32.31   [Description]    (hg19-Feb_2009)
EnsemblMIR496 - 14q32.31 [CytoView hg19]  MIR496 - 14q32.31 [CytoView hg38]
Mapping of homologs : NCBIMIR496 [Mapview hg19]  MIR496 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM609466
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR496
Alternative Splicing GalleryENSG00000207961
Gene ExpressionMIR496 [ NCBI-GEO ]   MIR496 [ EBI - ARRAY_EXPRESS ]   MIR496 [ SEEK ]   MIR496 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR496 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)574454
GTEX Portal (Tissue expression)MIR496
Human Protein AtlasENSG00000207961-MIR496 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR496
DMDM Disease mutations574454
Blocks (Seattle)MIR496
Human Protein Atlas [tissue]ENSG00000207961-MIR496 [tissue]
Protein Interaction databases
FunCoupENSG00000207961
BioGRIDMIR496
STRING (EMBL)MIR496
ZODIACMIR496
Ontologies - Pathways
Huge Navigator MIR496 [HugePedia]
snp3D : Map Gene to Disease574454
BioCentury BCIQMIR496
ClinGenMIR496
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD574454
Chemical/Pharm GKB GenePA164722742
Clinical trialMIR496
Miscellaneous
canSAR (ICR)MIR496 (select the gene name)
DataMed IndexMIR496
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR496
EVEXMIR496
GoPubMedMIR496
iHOPMIR496
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jan 17 18:24:44 CET 2019

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.