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MIR5000 (microRNA 5000)

Identity

Alias_symbol (synonym)hsa-mir-5000
Other alias-
HGNC (Hugo) MIR5000
LocusID (NCBI) 100846995
Atlas_Id 55076
Location 2p12  [Link to chromosome band 2p12]
Location_base_pair Starts at 75317939 and ends at 75318041 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR5000   43464
Cards
Entrez_Gene (NCBI)MIR5000  100846995  microRNA 5000
Aliases
GeneCards (Weizmann)MIR5000
Ensembl hg19 (Hinxton)ENSG00000263909 [Gene_View]  chr2:75317939-75318041 [Contig_View]  MIR5000 [Vega]
Ensembl hg38 (Hinxton)ENSG00000263909 [Gene_View]  chr2:75317939-75318041 [Contig_View]  MIR5000 [Vega]
ICGC DataPortalENSG00000263909
TCGA cBioPortalMIR5000
AceView (NCBI)MIR5000
Genatlas (Paris)MIR5000
WikiGenes100846995
SOURCE (Princeton)MIR5000
Genetics Home Reference (NIH)MIR5000
miRBaseMIR5000
dbDEMCMIR5000
Genomic and cartography
GoldenPath hg19 (UCSC)MIR5000  -     chr2:75317939-75318041 +  2p12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR5000  -     2p12   [Description]    (hg38-Dec_2013)
EnsemblMIR5000 - 2p12 [CytoView hg19]  MIR5000 - 2p12 [CytoView hg38]
Mapping of homologs : NCBIMIR5000 [Mapview hg19]  MIR5000 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_022184 NW_004929300
Consensus coding sequences : CCDS (NCBI)MIR5000
Alternative Splicing GalleryENSG00000263909
Gene ExpressionMIR5000 [ NCBI-GEO ]   MIR5000 [ EBI - ARRAY_EXPRESS ]   MIR5000 [ SEEK ]   MIR5000 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5000 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100846995
GTEX Portal (Tissue expression)MIR5000
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5000
DMDM Disease mutations100846995
Blocks (Seattle)MIR5000
Human Protein AtlasENSG00000263909
Protein Interaction databases
FunCoupENSG00000263909
BioGRIDMIR5000
STRING (EMBL)MIR5000
ZODIACMIR5000
Ontologies - Pathways
Huge Navigator MIR5000 [HugePedia]
snp3D : Map Gene to Disease100846995
BioCentury BCIQMIR5000
ClinGenMIR5000
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100846995
Clinical trialMIR5000
Miscellaneous
canSAR (ICR)MIR5000 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5000
EVEXMIR5000
GoPubMedMIR5000
iHOPMIR5000
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 13:16:21 CET 2017

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