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MIR5001 (microRNA 5001)

Identity

Alias_symbol (synonym)hsa-mir-5001
Other aliasmir-5001
HGNC (Hugo) MIR5001
LocusID (NCBI) 100847037
Atlas_Id 69725
Location 2q37.1  [Link to chromosome band 2q37]
Location_base_pair Starts at 232550474 and ends at 232550573 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR5001   43462
Cards
Entrez_Gene (NCBI)MIR5001  100847037  microRNA 5001
Aliasesmir-5001
GeneCards (Weizmann)MIR5001
Ensembl hg19 (Hinxton)ENSG00000266620 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000266620 [Gene_View]  chr2:232550474-232550573 [Contig_View]  MIR5001 [Vega]
ICGC DataPortalENSG00000266620
TCGA cBioPortalMIR5001
AceView (NCBI)MIR5001
Genatlas (Paris)MIR5001
WikiGenes100847037
SOURCE (Princeton)MIR5001
Genetics Home Reference (NIH)MIR5001
miRBaseMIR5001
dbDEMCMIR5001
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5001  -     chr2:232550474-232550573 -  2q37.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5001  -     2q37.1   [Description]    (hg19-Feb_2009)
EnsemblMIR5001 - 2q37.1 [CytoView hg19]  MIR5001 - 2q37.1 [CytoView hg38]
Mapping of homologs : NCBIMIR5001 [Mapview hg19]  MIR5001 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM611499
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR5001
Alternative Splicing GalleryENSG00000266620
Gene ExpressionMIR5001 [ NCBI-GEO ]   MIR5001 [ EBI - ARRAY_EXPRESS ]   MIR5001 [ SEEK ]   MIR5001 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5001 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100847037
GTEX Portal (Tissue expression)MIR5001
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5001
DMDM Disease mutations100847037
Blocks (Seattle)MIR5001
Human Protein AtlasENSG00000266620
Protein Interaction databases
FunCoupENSG00000266620
BioGRIDMIR5001
STRING (EMBL)MIR5001
ZODIACMIR5001
Ontologies - Pathways
Huge Navigator MIR5001 [HugePedia]
snp3D : Map Gene to Disease100847037
BioCentury BCIQMIR5001
ClinGenMIR5001
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100847037
Clinical trialMIR5001
Miscellaneous
canSAR (ICR)MIR5001 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5001
EVEXMIR5001
GoPubMedMIR5001
iHOPMIR5001
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:28:59 CEST 2017

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